Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCFC1R1Q9NWW0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCFC1R1Q9NWW0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HCFC1R1Q9NWW0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
HCFC1R1Q9NWW0 AL034346.1-201ENST00000568244 1277 ntBASIC22.37■■□□□ 1.17
HCFC1R1Q9NWW0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.37■■□□□ 1.17
HCFC1R1Q9NWW0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.37■■□□□ 1.17
HCFC1R1Q9NWW0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.37■■□□□ 1.17
HCFC1R1Q9NWW0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 MIR4651-201ENST00000582622 73 ntBASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HCFC1R1Q9NWW0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 AC133552.2-202ENST00000575694 574 ntBASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HCFC1R1Q9NWW0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 AC087742.1-201ENST00000575880 1738 ntBASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 AC137767.1-201ENST00000602918 1920 ntBASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 AC069152.1-201ENST00000438030 544 ntBASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 AC053503.5-201ENST00000601508 636 ntBASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HCFC1R1Q9NWW0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HCFC1R1Q9NWW0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HCFC1R1Q9NWW0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.33■■□□□ 1.17
HCFC1R1Q9NWW0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
HCFC1R1Q9NWW0 TERF1P5-201ENST00000477545 1207 ntBASIC22.33■■□□□ 1.17
HCFC1R1Q9NWW0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.33■■□□□ 1.17
HCFC1R1Q9NWW0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HCFC1R1Q9NWW0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HCFC1R1Q9NWW0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 AC013268.1-206ENST00000638368 961 ntBASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 AC112229.1-201ENST00000639295 961 ntBASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
HCFC1R1Q9NWW0 AC068338.2-201ENST00000563278 1430 ntBASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 CYP2T1P-201ENST00000432607 1285 ntBASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HCFC1R1Q9NWW0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 SLC7A5P1-201ENST00000568957 537 ntBASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 AC133041.1-202ENST00000642053 222 ntBASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HCFC1R1Q9NWW0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms