Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ECHDC1Q9NTX5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ECHDC1Q9NTX5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC26.16■■□□□ 1.78
ECHDC1Q9NTX5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
ECHDC1Q9NTX5 LINC00565-201ENST00000562710 2331 ntBASIC26.15■■□□□ 1.78
ECHDC1Q9NTX5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.15■■□□□ 1.78
ECHDC1Q9NTX5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ECHDC1Q9NTX5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.15■■□□□ 1.78
ECHDC1Q9NTX5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
ECHDC1Q9NTX5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ECHDC1Q9NTX5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ECHDC1Q9NTX5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.15■■□□□ 1.78
ECHDC1Q9NTX5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ECHDC1Q9NTX5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.14■■□□□ 1.78
ECHDC1Q9NTX5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
ECHDC1Q9NTX5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
ECHDC1Q9NTX5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
ECHDC1Q9NTX5 YBX1P1-201ENST00000445822 960 ntBASIC26.14■■□□□ 1.78
ECHDC1Q9NTX5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.14■■□□□ 1.78
ECHDC1Q9NTX5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC26.14■■□□□ 1.78
ECHDC1Q9NTX5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
ECHDC1Q9NTX5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
ECHDC1Q9NTX5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
ECHDC1Q9NTX5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.14■■□□□ 1.77
ECHDC1Q9NTX5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.14■■□□□ 1.77
ECHDC1Q9NTX5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ECHDC1Q9NTX5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
ECHDC1Q9NTX5 AC123595.1-201ENST00000440769 1046 ntBASIC26.13■■□□□ 1.77
ECHDC1Q9NTX5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.13■■□□□ 1.77
ECHDC1Q9NTX5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
ECHDC1Q9NTX5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ECHDC1Q9NTX5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.13■■□□□ 1.77
ECHDC1Q9NTX5 AC010542.4-201ENST00000563151 1910 ntBASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
ECHDC1Q9NTX5 LINC02228-203ENST00000641970 1355 ntBASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 AC003102.1-202ENST00000563394 1796 ntBASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC26.11■■□□□ 1.77
ECHDC1Q9NTX5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ECHDC1Q9NTX5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
ECHDC1Q9NTX5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ECHDC1Q9NTX5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms