Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 NTF6G-201ENST00000591094 616 ntBASIC20.06■□□□□ 0.8
KLHL1Q9NR64 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 GUSBP5-202ENST00000510805 1989 ntBASIC20.06■□□□□ 0.8
KLHL1Q9NR64 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
KLHL1Q9NR64 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 AC087239.1-201ENST00000622671 572 ntBASIC20.05■□□□□ 0.8
KLHL1Q9NR64 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KLHL1Q9NR64 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 TERF1P2-201ENST00000583350 1212 ntBASIC20.04■□□□□ 0.8
KLHL1Q9NR64 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 AL137784.2-201ENST00000607332 1000 ntBASIC20.04■□□□□ 0.8
KLHL1Q9NR64 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
KLHL1Q9NR64 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 AC068587.7-201ENST00000641602 218 ntBASIC20.03■□□□□ 0.8
KLHL1Q9NR64 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHL1Q9NR64 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
KLHL1Q9NR64 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL1Q9NR64 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL1Q9NR64 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL1Q9NR64 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL1Q9NR64 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL1Q9NR64 AC010141.3-201ENST00000456659 717 ntBASIC20.02■□□□□ 0.8
KLHL1Q9NR64 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KLHL1Q9NR64 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHL1Q9NR64 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHL1Q9NR64 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KLHL1Q9NR64 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHL1Q9NR64 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KLHL1Q9NR64 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
KLHL1Q9NR64 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KLHL1Q9NR64 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20■□□□□ 0.79
KLHL1Q9NR64 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20■□□□□ 0.79
KLHL1Q9NR64 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms