Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 AL049637.2-201ENST00000641778 930 ntBASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.74■■□□□ 1.07
LRFN3Q9BTN0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 HLA-B-256ENST00000639848 1089 ntBASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN3Q9BTN0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 AC092865.7-201ENST00000641832 219 ntBASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.72■■□□□ 1.07
LRFN3Q9BTN0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRFN3Q9BTN0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRFN3Q9BTN0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRFN3Q9BTN0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.71■■□□□ 1.07
LRFN3Q9BTN0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.71■■□□□ 1.07
LRFN3Q9BTN0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.71■■□□□ 1.07
LRFN3Q9BTN0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.71■■□□□ 1.07
LRFN3Q9BTN0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LRFN3Q9BTN0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 AL355075.4-201ENST00000554988 638 ntBASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 AP001412.1-201ENST00000608405 714 ntBASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN3Q9BTN0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 AC069544.1-201ENST00000609399 999 ntBASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRFN3Q9BTN0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 HLA-L-211ENST00000482052 1765 ntBASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRFN3Q9BTN0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 AL121894.2-201ENST00000602977 491 ntBASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRFN3Q9BTN0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
LRFN3Q9BTN0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.66■■□□□ 1.06
LRFN3Q9BTN0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRFN3Q9BTN0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.66■■□□□ 1.06
LRFN3Q9BTN0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.66■■□□□ 1.06
LRFN3Q9BTN0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.66■■□□□ 1.06
LRFN3Q9BTN0 AL162412.1-201ENST00000567129 965 ntBASIC21.66■■□□□ 1.06
LRFN3Q9BTN0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.66■■□□□ 1.06
LRFN3Q9BTN0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms