Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.08■□□□□ 0.96
CCM2Q9BSQ5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCM2Q9BSQ5 FAM99A-202ENST00000538190 1989 ntBASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 C11orf96-202ENST00000528572 1834 ntBASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCM2Q9BSQ5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCM2Q9BSQ5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 AP006587.3-201ENST00000525742 1516 ntBASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 MIR5787-201ENST00000611784 55 ntBASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCM2Q9BSQ5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 AC055733.4-201ENST00000638462 1354 ntBASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCM2Q9BSQ5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 TERF1P2-201ENST00000583350 1212 ntBASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 AC087623.3-201ENST00000607047 1098 ntBASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCM2Q9BSQ5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.02■□□□□ 0.95
CCM2Q9BSQ5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms