Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC14.29□□□□□ -0.12
LITAFQ99732 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LITAFQ99732 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LITAFQ99732 SRP68-213ENST00000629930 165 ntTSL 5 BASIC14.29□□□□□ -0.12
LITAFQ99732 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.29□□□□□ -0.12
LITAFQ99732 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.29□□□□□ -0.12
LITAFQ99732 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.29□□□□□ -0.12
LITAFQ99732 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
LITAFQ99732 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.29□□□□□ -0.12
LITAFQ99732 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LITAFQ99732 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LITAFQ99732 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
LITAFQ99732 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.28□□□□□ -0.12
LITAFQ99732 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
LITAFQ99732 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LITAFQ99732 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LITAFQ99732 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
LITAFQ99732 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LITAFQ99732 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LITAFQ99732 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LITAFQ99732 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LITAFQ99732 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LITAFQ99732 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LITAFQ99732 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LITAFQ99732 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LITAFQ99732 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
LITAFQ99732 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LITAFQ99732 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LITAFQ99732 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LITAFQ99732 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC14.27□□□□□ -0.13
LITAFQ99732 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LITAFQ99732 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
LITAFQ99732 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LITAFQ99732 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LITAFQ99732 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.26□□□□□ -0.13
LITAFQ99732 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.26□□□□□ -0.13
LITAFQ99732 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LITAFQ99732 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LITAFQ99732 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
LITAFQ99732 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LITAFQ99732 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LITAFQ99732 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LITAFQ99732 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LITAFQ99732 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LITAFQ99732 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LITAFQ99732 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.26□□□□□ -0.13
LITAFQ99732 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LITAFQ99732 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LITAFQ99732 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LITAFQ99732 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LITAFQ99732 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.25□□□□□ -0.13
LITAFQ99732 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
LITAFQ99732 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LITAFQ99732 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.25□□□□□ -0.13
LITAFQ99732 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LITAFQ99732 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.25□□□□□ -0.13
LITAFQ99732 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.25□□□□□ -0.13
LITAFQ99732 RPS2P35-201ENST00000443417 897 ntBASIC14.25□□□□□ -0.13
LITAFQ99732 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.25□□□□□ -0.13
LITAFQ99732 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.25□□□□□ -0.13
LITAFQ99732 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC14.25□□□□□ -0.13
LITAFQ99732 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LITAFQ99732 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LITAFQ99732 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LITAFQ99732 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms