Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 IKBKGP1-201ENST00000612193 1073 ntBASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDK5RAP1Q96SZ6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.24■■□□□ 1.15
CDK5RAP1Q96SZ6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDK5RAP1Q96SZ6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.24■■□□□ 1.15
CDK5RAP1Q96SZ6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.24■■□□□ 1.15
CDK5RAP1Q96SZ6 AC006015.1-201ENST00000429970 570 ntBASIC22.24■■□□□ 1.15
CDK5RAP1Q96SZ6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.24■■□□□ 1.15
CDK5RAP1Q96SZ6 AC104187.1-201ENST00000607510 612 ntBASIC22.24■■□□□ 1.15
CDK5RAP1Q96SZ6 AC092437.1-201ENST00000624794 1048 ntBASIC22.24■■□□□ 1.15
CDK5RAP1Q96SZ6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDK5RAP1Q96SZ6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 AC080038.3-201ENST00000623346 1952 ntBASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.23■■□□□ 1.15
CDK5RAP1Q96SZ6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDK5RAP1Q96SZ6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 EEF1DP3-203ENST00000566025 782 ntBASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 AC138907.5-202ENST00000569484 235 ntBASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 AC053503.5-201ENST00000601508 636 ntBASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDK5RAP1Q96SZ6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CDK5RAP1Q96SZ6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDK5RAP1Q96SZ6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 AP001160.3-201ENST00000601484 763 ntBASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 AC242852.2-201ENST00000615738 1807 ntBASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDK5RAP1Q96SZ6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDK5RAP1Q96SZ6 AC004911.1-201ENST00000416316 871 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms