Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC46A1Q96NT5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 MIR4651-201ENST00000582622 73 ntBASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC46A1Q96NT5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC46A1Q96NT5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC46A1Q96NT5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC46A1Q96NT5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SLC46A1Q96NT5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC46A1Q96NT5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC46A1Q96NT5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC46A1Q96NT5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC46A1Q96NT5 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC46A1Q96NT5 AC133552.2-202ENST00000575694 574 ntBASIC20.51■□□□□ 0.87
SLC46A1Q96NT5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC46A1Q96NT5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC46A1Q96NT5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC46A1Q96NT5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC46A1Q96NT5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC46A1Q96NT5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC46A1Q96NT5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SLC46A1Q96NT5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC46A1Q96NT5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC46A1Q96NT5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SLC46A1Q96NT5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 CNN2P6-201ENST00000439038 900 ntBASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC46A1Q96NT5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 AC105036.2-201ENST00000569468 176 ntBASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC46A1Q96NT5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.47■□□□□ 0.87
SLC46A1Q96NT5 AC055733.4-201ENST00000638462 1354 ntBASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 KRT18P20-201ENST00000548986 1279 ntBASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC46A1Q96NT5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.45■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms