Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00479Q96M42 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00479Q96M42 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00479Q96M42 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00479Q96M42 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.3■□□□□ 0.2
LINC00479Q96M42 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00479Q96M42 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00479Q96M42 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00479Q96M42 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.3■□□□□ 0.2
LINC00479Q96M42 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00479Q96M42 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00479Q96M42 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00479Q96M42 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00479Q96M42 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00479Q96M42 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC00479Q96M42 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LINC00479Q96M42 FEM1AP1-201ENST00000431297 1995 ntBASIC16.29■□□□□ 0.2
LINC00479Q96M42 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00479Q96M42 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00479Q96M42 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00479Q96M42 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC00479Q96M42 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00479Q96M42 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LINC00479Q96M42 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00479Q96M42 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00479Q96M42 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00479Q96M42 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
LINC00479Q96M42 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00479Q96M42 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00479Q96M42 NTF6A-201ENST00000591175 560 ntBASIC16.29■□□□□ 0.2
LINC00479Q96M42 MIR6722-201ENST00000617286 78 ntBASIC16.29■□□□□ 0.2
LINC00479Q96M42 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00479Q96M42 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00479Q96M42 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LINC00479Q96M42 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00479Q96M42 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC00479Q96M42 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LINC00479Q96M42 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00479Q96M42 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00479Q96M42 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00479Q96M42 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
LINC00479Q96M42 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00479Q96M42 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00479Q96M42 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00479Q96M42 ABHD17AP5-201ENST00000580133 923 ntBASIC16.27■□□□□ 0.2
LINC00479Q96M42 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00479Q96M42 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00479Q96M42 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LINC00479Q96M42 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00479Q96M42 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00479Q96M42 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00479Q96M42 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00479Q96M42 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00479Q96M42 AC009102.2-201ENST00000606772 1639 ntBASIC16.27■□□□□ 0.19
LINC00479Q96M42 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC00479Q96M42 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LINC00479Q96M42 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00479Q96M42 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LINC00479Q96M42 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC00479Q96M42 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 MIR4508-201ENST00000584178 70 ntBASIC16.26■□□□□ 0.19
LINC00479Q96M42 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.26■□□□□ 0.19
LINC00479Q96M42 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC00479Q96M42 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00479Q96M42 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00479Q96M42 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00479Q96M42 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00479Q96M42 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00479Q96M42 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
LINC00479Q96M42 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00479Q96M42 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms