Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 NTF6G-201ENST00000591094 616 ntBASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.13■□□□□ 0.97
SH3KBP1Q96B97 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 TPRG1LP1-201ENST00000598702 760 ntBASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SH3KBP1Q96B97 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 AC022517.1-201ENST00000592429 346 ntBASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 AC087742.1-201ENST00000575880 1738 ntBASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SH3KBP1Q96B97 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.1■□□□□ 0.97
SH3KBP1Q96B97 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SH3KBP1Q96B97 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3KBP1Q96B97 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3KBP1Q96B97 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3KBP1Q96B97 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.08■□□□□ 0.97
SH3KBP1Q96B97 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SH3KBP1Q96B97 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.08■□□□□ 0.97
SH3KBP1Q96B97 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SH3KBP1Q96B97 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.08■□□□□ 0.97
SH3KBP1Q96B97 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.08■□□□□ 0.96
SH3KBP1Q96B97 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SH3KBP1Q96B97 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 AL137784.2-201ENST00000607332 1000 ntBASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SH3KBP1Q96B97 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms