Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLNQ969V3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLNQ969V3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLNQ969V3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.66■□□□□ 0.9
NCLNQ969V3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.65■□□□□ 0.9
NCLNQ969V3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLNQ969V3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLNQ969V3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NCLNQ969V3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLNQ969V3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.65■□□□□ 0.9
NCLNQ969V3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLNQ969V3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.65■□□□□ 0.9
NCLNQ969V3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NCLNQ969V3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLNQ969V3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NCLNQ969V3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCLNQ969V3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLNQ969V3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLNQ969V3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.65■□□□□ 0.9
NCLNQ969V3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.65■□□□□ 0.9
NCLNQ969V3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLNQ969V3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.65■□□□□ 0.9
NCLNQ969V3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
NCLNQ969V3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCLNQ969V3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.64■□□□□ 0.9
NCLNQ969V3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
NCLNQ969V3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCLNQ969V3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NCLNQ969V3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLNQ969V3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NCLNQ969V3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLNQ969V3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.64■□□□□ 0.89
NCLNQ969V3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NCLNQ969V3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLNQ969V3 LINC01960-201ENST00000563759 1884 ntBASIC20.64■□□□□ 0.89
NCLNQ969V3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
NCLNQ969V3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLNQ969V3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NCLNQ969V3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCLNQ969V3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NCLNQ969V3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.63■□□□□ 0.89
NCLNQ969V3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.63■□□□□ 0.89
NCLNQ969V3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLNQ969V3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NCLNQ969V3 MIR939-201ENST00000401314 82 ntBASIC20.63■□□□□ 0.89
NCLNQ969V3 AC008764.7-201ENST00000593779 1081 ntBASIC20.63■□□□□ 0.89
NCLNQ969V3 AL136967.2-201ENST00000623968 743 ntBASIC20.63■□□□□ 0.89
NCLNQ969V3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NCLNQ969V3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLNQ969V3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLNQ969V3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.62■□□□□ 0.89
NCLNQ969V3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NCLNQ969V3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NCLNQ969V3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.62■□□□□ 0.89
NCLNQ969V3 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.62■□□□□ 0.89
NCLNQ969V3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLNQ969V3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NCLNQ969V3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NCLNQ969V3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NCLNQ969V3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 AL024507.2-201ENST00000606070 2574 ntBASIC20.61■□□□□ 0.89
NCLNQ969V3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.61■□□□□ 0.89
NCLNQ969V3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.61■□□□□ 0.89
NCLNQ969V3 AC027682.1-201ENST00000562846 899 ntBASIC20.61■□□□□ 0.89
NCLNQ969V3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
NCLNQ969V3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.61■□□□□ 0.89
NCLNQ969V3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.61■□□□□ 0.89
NCLNQ969V3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.61■□□□□ 0.89
NCLNQ969V3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 FAM99A-202ENST00000538190 1989 ntBASIC20.61■□□□□ 0.89
NCLNQ969V3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.61■□□□□ 0.89
NCLNQ969V3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NCLNQ969V3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.6■□□□□ 0.89
NCLNQ969V3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.6■□□□□ 0.89
NCLNQ969V3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLNQ969V3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.6■□□□□ 0.89
NCLNQ969V3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLNQ969V3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLNQ969V3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.6■□□□□ 0.89
NCLNQ969V3 AC099791.1-201ENST00000416440 715 ntBASIC20.6■□□□□ 0.89
NCLNQ969V3 BX842568.3-201ENST00000418104 571 ntBASIC20.6■□□□□ 0.89
NCLNQ969V3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.6■□□□□ 0.89
NCLNQ969V3 AC091305.1-201ENST00000479476 895 ntBASIC20.6■□□□□ 0.89
NCLNQ969V3 AC233992.3-201ENST00000607491 485 ntBASIC20.6■□□□□ 0.89
NCLNQ969V3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NCLNQ969V3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NCLNQ969V3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NCLNQ969V3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLNQ969V3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NCLNQ969V3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms