Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC28.27■■■□□ 2.12
RAPGEF4Q8WZA2 AC066615.1-201ENST00000640911 628 ntBASIC28.27■■■□□ 2.12
RAPGEF4Q8WZA2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF4Q8WZA2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RAPGEF4Q8WZA2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
RAPGEF4Q8WZA2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC28.26■■■□□ 2.12
RAPGEF4Q8WZA2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.26■■■□□ 2.11
RAPGEF4Q8WZA2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RAPGEF4Q8WZA2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RAPGEF4Q8WZA2 CYP2T1P-201ENST00000432607 1285 ntBASIC28.26■■■□□ 2.11
RAPGEF4Q8WZA2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC28.26■■■□□ 2.11
RAPGEF4Q8WZA2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC28.26■■■□□ 2.11
RAPGEF4Q8WZA2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC28.26■■■□□ 2.11
RAPGEF4Q8WZA2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF4Q8WZA2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC28.25■■■□□ 2.11
RAPGEF4Q8WZA2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RAPGEF4Q8WZA2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC28.25■■■□□ 2.11
RAPGEF4Q8WZA2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC28.25■■■□□ 2.11
RAPGEF4Q8WZA2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC28.25■■■□□ 2.11
RAPGEF4Q8WZA2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 MIR4758-201ENST00000577688 71 ntBASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC28.24■■■□□ 2.11
RAPGEF4Q8WZA2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 FAM201B-201ENST00000458407 597 ntBASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 AC007322.4-201ENST00000509611 723 ntBASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RAPGEF4Q8WZA2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC28.22■■■□□ 2.11
RAPGEF4Q8WZA2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RAPGEF4Q8WZA2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC28.2■■■□□ 2.11
RAPGEF4Q8WZA2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.2■■■□□ 2.11
RAPGEF4Q8WZA2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.2■■■□□ 2.11
RAPGEF4Q8WZA2 MKRN4P-201ENST00000444706 1521 ntBASIC28.2■■■□□ 2.1
RAPGEF4Q8WZA2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
RAPGEF4Q8WZA2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
RAPGEF4Q8WZA2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC28.2■■■□□ 2.1
RAPGEF4Q8WZA2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC28.2■■■□□ 2.1
RAPGEF4Q8WZA2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
RAPGEF4Q8WZA2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
RAPGEF4Q8WZA2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 MIPEPP3-201ENST00000412105 444 ntBASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 MARS-234ENST00000630571 216 ntTSL 5 BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 MARS-235ENST00000630803 183 ntTSL 3 BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RAPGEF4Q8WZA2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RAPGEF4Q8WZA2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
RAPGEF4Q8WZA2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC28.18■■■□□ 2.1
RAPGEF4Q8WZA2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC28.18■■■□□ 2.1
RAPGEF4Q8WZA2 OR10C1-204ENST00000622521 1039 ntBASIC28.18■■■□□ 2.1
RAPGEF4Q8WZA2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RAPGEF4Q8WZA2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
RAPGEF4Q8WZA2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.17■■■□□ 2.1
RAPGEF4Q8WZA2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF4Q8WZA2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC28.17■■■□□ 2.1
RAPGEF4Q8WZA2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF4Q8WZA2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC28.17■■■□□ 2.1
RAPGEF4Q8WZA2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC28.17■■■□□ 2.1
RAPGEF4Q8WZA2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC28.17■■■□□ 2.1
RAPGEF4Q8WZA2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF4Q8WZA2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
RAPGEF4Q8WZA2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms