Protein–RNA interactions for Protein: Q8WXF1

PSPC1, Paraspeckle component 1, humanhuman

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1Q8WXF1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
PSPC1Q8WXF1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PSPC1Q8WXF1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 AC137761.2-201ENST00000561729 223 ntBASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 AC145350.3-201ENST00000569033 163 ntBASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PSPC1Q8WXF1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 AP006587.3-201ENST00000525742 1516 ntBASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PSPC1Q8WXF1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 AC233723.2-201ENST00000623798 2106 ntBASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 AC004911.1-201ENST00000416316 871 ntBASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PSPC1Q8WXF1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PSPC1Q8WXF1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PSPC1Q8WXF1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PSPC1Q8WXF1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PSPC1Q8WXF1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PSPC1Q8WXF1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PSPC1Q8WXF1 AC016769.1-201ENST00000409132 1010 ntBASIC23.64■■□□□ 1.37
PSPC1Q8WXF1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PSPC1Q8WXF1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.64■■□□□ 1.37
PSPC1Q8WXF1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PSPC1Q8WXF1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.64■■□□□ 1.37
PSPC1Q8WXF1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PSPC1Q8WXF1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 AC080038.3-201ENST00000623346 1952 ntBASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 AC006015.1-201ENST00000429970 570 ntBASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 AC104187.1-201ENST00000607510 612 ntBASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.63■■□□□ 1.37
PSPC1Q8WXF1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PSPC1Q8WXF1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PSPC1Q8WXF1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PSPC1Q8WXF1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PSPC1Q8WXF1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms