Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.27■■□□□ 1
CKAP2Q8WWK9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CKAP2Q8WWK9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.27■■□□□ 1
CKAP2Q8WWK9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CKAP2Q8WWK9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 GABARAPL3-202ENST00000624044 1851 ntBASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
CKAP2Q8WWK9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CKAP2Q8WWK9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CKAP2Q8WWK9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.24■□□□□ 0.99
CKAP2Q8WWK9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CKAP2Q8WWK9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CKAP2Q8WWK9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.24■□□□□ 0.99
CKAP2Q8WWK9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CKAP2Q8WWK9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CKAP2Q8WWK9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 AC079089.2-201ENST00000531211 1277 ntBASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CKAP2Q8WWK9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 MIR6722-201ENST00000617286 78 ntBASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.22■□□□□ 0.99
CKAP2Q8WWK9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CKAP2Q8WWK9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.21■□□□□ 0.99
CKAP2Q8WWK9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CKAP2Q8WWK9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CKAP2Q8WWK9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CKAP2Q8WWK9 AP005212.1-201ENST00000581547 1997 ntBASIC21.21■□□□□ 0.99
CKAP2Q8WWK9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CKAP2Q8WWK9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CKAP2Q8WWK9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.2■□□□□ 0.98
CKAP2Q8WWK9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
CKAP2Q8WWK9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms