Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CCER1Q8TC90 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC31.88■■■□□ 2.69
CCER1Q8TC90 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCER1Q8TC90 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
CCER1Q8TC90 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCER1Q8TC90 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC31.87■■■□□ 2.69
CCER1Q8TC90 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCER1Q8TC90 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CCER1Q8TC90 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
CCER1Q8TC90 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC31.87■■■□□ 2.69
CCER1Q8TC90 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCER1Q8TC90 AC068587.7-201ENST00000641602 218 ntBASIC31.86■■■□□ 2.69
CCER1Q8TC90 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCER1Q8TC90 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCER1Q8TC90 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
CCER1Q8TC90 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC31.85■■■□□ 2.69
CCER1Q8TC90 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
CCER1Q8TC90 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCER1Q8TC90 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCER1Q8TC90 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCER1Q8TC90 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCER1Q8TC90 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC31.84■■■□□ 2.69
CCER1Q8TC90 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCER1Q8TC90 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC31.84■■■□□ 2.69
CCER1Q8TC90 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCER1Q8TC90 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC31.84■■■□□ 2.69
CCER1Q8TC90 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCER1Q8TC90 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC31.84■■■□□ 2.69
CCER1Q8TC90 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC31.84■■■□□ 2.69
CCER1Q8TC90 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
CCER1Q8TC90 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC31.83■■■□□ 2.69
CCER1Q8TC90 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
CCER1Q8TC90 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC31.83■■■□□ 2.69
CCER1Q8TC90 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
CCER1Q8TC90 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC31.83■■■□□ 2.69
CCER1Q8TC90 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.83■■■□□ 2.69
CCER1Q8TC90 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC31.83■■■□□ 2.69
CCER1Q8TC90 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCER1Q8TC90 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.83■■■□□ 2.69
CCER1Q8TC90 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC31.83■■■□□ 2.69
CCER1Q8TC90 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCER1Q8TC90 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCER1Q8TC90 AC010141.3-201ENST00000456659 717 ntBASIC31.82■■■□□ 2.68
CCER1Q8TC90 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
CCER1Q8TC90 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
CCER1Q8TC90 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.82■■■□□ 2.68
CCER1Q8TC90 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCER1Q8TC90 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCER1Q8TC90 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCER1Q8TC90 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCER1Q8TC90 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCER1Q8TC90 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.82■■■□□ 2.68
CCER1Q8TC90 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
CCER1Q8TC90 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC31.81■■■□□ 2.68
CCER1Q8TC90 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC31.81■■■□□ 2.68
CCER1Q8TC90 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCER1Q8TC90 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.81■■■□□ 2.68
CCER1Q8TC90 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCER1Q8TC90 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CCER1Q8TC90 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC31.81■■■□□ 2.68
CCER1Q8TC90 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCER1Q8TC90 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC31.8■■■□□ 2.68
CCER1Q8TC90 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC31.8■■■□□ 2.68
CCER1Q8TC90 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCER1Q8TC90 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC31.8■■■□□ 2.68
CCER1Q8TC90 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCER1Q8TC90 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCER1Q8TC90 AC104564.3-201ENST00000582367 638 ntBASIC31.8■■■□□ 2.68
CCER1Q8TC90 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCER1Q8TC90 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC31.8■■■□□ 2.68
CCER1Q8TC90 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CCER1Q8TC90 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CCER1Q8TC90 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CCER1Q8TC90 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CCER1Q8TC90 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
CCER1Q8TC90 PTCHD3P2-201ENST00000424937 1205 ntBASIC31.79■■■□□ 2.68
CCER1Q8TC90 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CCER1Q8TC90 AC087239.1-201ENST00000622671 572 ntBASIC31.79■■■□□ 2.68
CCER1Q8TC90 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CCER1Q8TC90 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCER1Q8TC90 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCER1Q8TC90 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCER1Q8TC90 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CCER1Q8TC90 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCER1Q8TC90 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CCER1Q8TC90 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCER1Q8TC90 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC31.77■■■□□ 2.68
CCER1Q8TC90 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCER1Q8TC90 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.77■■■□□ 2.68
CCER1Q8TC90 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms