Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.27■■□□□ 1
RAB3IL1Q8TBN0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
RAB3IL1Q8TBN0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
RAB3IL1Q8TBN0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RAB3IL1Q8TBN0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RAB3IL1Q8TBN0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB3IL1Q8TBN0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB3IL1Q8TBN0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RAB3IL1Q8TBN0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.25■□□□□ 0.99
RAB3IL1Q8TBN0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RAB3IL1Q8TBN0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RAB3IL1Q8TBN0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB3IL1Q8TBN0 AF106564.1-201ENST00000607058 2553 ntBASIC21.25■□□□□ 0.99
RAB3IL1Q8TBN0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RAB3IL1Q8TBN0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB3IL1Q8TBN0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 AC104564.3-201ENST00000582367 638 ntBASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 AC009102.2-201ENST00000606772 1639 ntBASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB3IL1Q8TBN0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB3IL1Q8TBN0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB3IL1Q8TBN0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 C17orf82-201ENST00000623772 1530 ntBASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 AL499627.2-201ENST00000606283 725 ntBASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB3IL1Q8TBN0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.2■□□□□ 0.99
RAB3IL1Q8TBN0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 AC103834.1-201ENST00000520383 144 ntBASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 AC103724.3-201ENST00000564481 992 ntBASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 AC021242.3-201ENST00000607598 1377 ntBASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB3IL1Q8TBN0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB3IL1Q8TBN0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms