Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TTC16Q8NEE8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TTC16Q8NEE8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TTC16Q8NEE8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 AC006015.1-201ENST00000429970 570 ntBASIC22.41■■□□□ 1.18
TTC16Q8NEE8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 AC104187.1-201ENST00000607510 612 ntBASIC22.41■■□□□ 1.18
TTC16Q8NEE8 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.41■■□□□ 1.18
TTC16Q8NEE8 AP004607.7-201ENST00000527152 1677 ntBASIC22.41■■□□□ 1.18
TTC16Q8NEE8 AIRN-201ENST00000601203 4374 ntBASIC22.41■■□□□ 1.18
TTC16Q8NEE8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.41■■□□□ 1.18
TTC16Q8NEE8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.4■■□□□ 1.18
TTC16Q8NEE8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TTC16Q8NEE8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.4■■□□□ 1.18
TTC16Q8NEE8 ID1-201ENST00000376105 1233 ntBASIC22.4■■□□□ 1.18
TTC16Q8NEE8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC16Q8NEE8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.4■■□□□ 1.18
TTC16Q8NEE8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC16Q8NEE8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TTC16Q8NEE8 AC073111.5-205ENST00000641717 521 ntBASIC22.4■■□□□ 1.18
TTC16Q8NEE8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TTC16Q8NEE8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
TTC16Q8NEE8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TTC16Q8NEE8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
TTC16Q8NEE8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC16Q8NEE8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TTC16Q8NEE8 AC079089.2-201ENST00000531211 1277 ntBASIC22.39■■□□□ 1.17
TTC16Q8NEE8 AC009237.3-201ENST00000393279 1427 ntBASIC22.39■■□□□ 1.17
TTC16Q8NEE8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 HLA-L-209ENST00000420110 1011 ntBASIC22.38■■□□□ 1.17
TTC16Q8NEE8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 OR7E47P-201ENST00000546390 1422 ntBASIC22.38■■□□□ 1.17
TTC16Q8NEE8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
TTC16Q8NEE8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC16Q8NEE8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TTC16Q8NEE8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.37■■□□□ 1.17
TTC16Q8NEE8 AC011767.1-201ENST00000617410 1153 ntBASIC22.37■■□□□ 1.17
TTC16Q8NEE8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.37■■□□□ 1.17
TTC16Q8NEE8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
TTC16Q8NEE8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TTC16Q8NEE8 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.37■■□□□ 1.17
TTC16Q8NEE8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.37■■□□□ 1.17
TTC16Q8NEE8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC16Q8NEE8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
TTC16Q8NEE8 KRT87P-202ENST00000534226 1464 ntBASIC22.36■■□□□ 1.17
TTC16Q8NEE8 C9orf163-202ENST00000624034 2573 ntBASIC22.36■■□□□ 1.17
TTC16Q8NEE8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC16Q8NEE8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC16Q8NEE8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.36■■□□□ 1.17
TTC16Q8NEE8 CDCA4P2-201ENST00000441182 718 ntBASIC22.36■■□□□ 1.17
TTC16Q8NEE8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TTC16Q8NEE8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.36■■□□□ 1.17
TTC16Q8NEE8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TTC16Q8NEE8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
TTC16Q8NEE8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TTC16Q8NEE8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC16Q8NEE8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.35■■□□□ 1.17
TTC16Q8NEE8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TTC16Q8NEE8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TTC16Q8NEE8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 AC006970.2-201ENST00000450065 779 ntBASIC22.34■■□□□ 1.17
TTC16Q8NEE8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TTC16Q8NEE8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC16Q8NEE8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
TTC16Q8NEE8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
TTC16Q8NEE8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC16Q8NEE8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC16Q8NEE8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.33■■□□□ 1.17
TTC16Q8NEE8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.33■■□□□ 1.17
TTC16Q8NEE8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TTC16Q8NEE8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TTC16Q8NEE8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms