Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC142381.4-202ENST00000563973 229 ntBASIC21.97■■□□□ 1.11
SIX5Q8N196 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.97■■□□□ 1.11
SIX5Q8N196 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.97■■□□□ 1.11
SIX5Q8N196 AC006058.3-201ENST00000606217 1069 ntBASIC21.97■■□□□ 1.11
SIX5Q8N196 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
SIX5Q8N196 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIX5Q8N196 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SIX5Q8N196 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIX5Q8N196 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SIX5Q8N196 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SIX5Q8N196 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.96■■□□□ 1.11
SIX5Q8N196 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.96■■□□□ 1.11
SIX5Q8N196 AC069236.1-201ENST00000604339 616 ntBASIC21.96■■□□□ 1.11
SIX5Q8N196 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.96■■□□□ 1.11
SIX5Q8N196 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SIX5Q8N196 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SIX5Q8N196 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIX5Q8N196 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SIX5Q8N196 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.95■■□□□ 1.1
SIX5Q8N196 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SIX5Q8N196 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SIX5Q8N196 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIX5Q8N196 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIX5Q8N196 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.95■■□□□ 1.1
SIX5Q8N196 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.95■■□□□ 1.1
SIX5Q8N196 AC097658.1-201ENST00000475555 843 ntBASIC21.95■■□□□ 1.1
SIX5Q8N196 AC007322.4-201ENST00000509611 723 ntBASIC21.95■■□□□ 1.1
SIX5Q8N196 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.95■■□□□ 1.1
SIX5Q8N196 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SIX5Q8N196 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIX5Q8N196 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SIX5Q8N196 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIX5Q8N196 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SIX5Q8N196 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SIX5Q8N196 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.94■■□□□ 1.1
SIX5Q8N196 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SIX5Q8N196 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.94■■□□□ 1.1
SIX5Q8N196 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIX5Q8N196 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.94■■□□□ 1.1
SIX5Q8N196 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.94■■□□□ 1.1
SIX5Q8N196 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SIX5Q8N196 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.94■■□□□ 1.1
SIX5Q8N196 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SIX5Q8N196 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIX5Q8N196 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIX5Q8N196 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIX5Q8N196 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIX5Q8N196 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SIX5Q8N196 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SIX5Q8N196 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SIX5Q8N196 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SIX5Q8N196 AL512625.2-201ENST00000417533 625 ntBASIC21.93■■□□□ 1.1
SIX5Q8N196 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SIX5Q8N196 AC128676.1-201ENST00000454392 318 ntBASIC21.93■■□□□ 1.1
SIX5Q8N196 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.93■■□□□ 1.1
SIX5Q8N196 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.93■■□□□ 1.1
SIX5Q8N196 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SIX5Q8N196 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
SIX5Q8N196 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SIX5Q8N196 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.92■■□□□ 1.1
SIX5Q8N196 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.92■■□□□ 1.1
SIX5Q8N196 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.92■■□□□ 1.1
SIX5Q8N196 MYC-209ENST00000641252 345 ntBASIC21.92■■□□□ 1.1
SIX5Q8N196 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SIX5Q8N196 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.92■■□□□ 1.1
SIX5Q8N196 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 AC142381.3-201ENST00000568208 1670 ntBASIC21.91■■□□□ 1.1
SIX5Q8N196 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SIX5Q8N196 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.91■■□□□ 1.1
SIX5Q8N196 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.91■■□□□ 1.1
SIX5Q8N196 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.91■■□□□ 1.1
SIX5Q8N196 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.91■■□□□ 1.1
SIX5Q8N196 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SIX5Q8N196 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.9■■□□□ 1.1
SIX5Q8N196 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SIX5Q8N196 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIX5Q8N196 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIX5Q8N196 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SIX5Q8N196 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SIX5Q8N196 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SIX5Q8N196 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.9■■□□□ 1.1
SIX5Q8N196 UNC93B4-201ENST00000505679 747 ntBASIC21.9■■□□□ 1.1
SIX5Q8N196 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms