Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.27■■□□□ 1
TRIM42Q8IWZ5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
TRIM42Q8IWZ5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM42Q8IWZ5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM42Q8IWZ5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM42Q8IWZ5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM42Q8IWZ5 OXCT2P1-201ENST00000447263 1535 ntBASIC21.24■□□□□ 0.99
TRIM42Q8IWZ5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM42Q8IWZ5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM42Q8IWZ5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM42Q8IWZ5 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM42Q8IWZ5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM42Q8IWZ5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM42Q8IWZ5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM42Q8IWZ5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM42Q8IWZ5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 AC009102.2-201ENST00000606772 1639 ntBASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 AC239859.2-201ENST00000444165 318 ntBASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 AC079089.2-201ENST00000531211 1277 ntBASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM42Q8IWZ5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM42Q8IWZ5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM42Q8IWZ5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRIM42Q8IWZ5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
TRIM42Q8IWZ5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRIM42Q8IWZ5 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
TRIM42Q8IWZ5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
TRIM42Q8IWZ5 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 AL157384.1-201ENST00000445995 2473 ntBASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 C17orf82-201ENST00000623772 1530 ntBASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM42Q8IWZ5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms