Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRTM4Q86VH4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 AP004607.4-201ENST00000530158 1459 ntBASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 KRT87P-202ENST00000534226 1464 ntBASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 AC012676.1-201ENST00000574705 1949 ntBASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 AC004854.2-201ENST00000608450 1441 ntBASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRRTM4Q86VH4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRRTM4Q86VH4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRRTM4Q86VH4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRRTM4Q86VH4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21■□□□□ 0.95
LRRTM4Q86VH4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LRRTM4Q86VH4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
LRRTM4Q86VH4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21■□□□□ 0.95
LRRTM4Q86VH4 KRT18P61-201ENST00000585825 1298 ntBASIC21■□□□□ 0.95
LRRTM4Q86VH4 AC092666.2-201ENST00000613287 246 ntBASIC21■□□□□ 0.95
LRRTM4Q86VH4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.99■□□□□ 0.95
LRRTM4Q86VH4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 AC133561.1-201ENST00000568600 2415 ntBASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 KRT19P1-201ENST00000405746 1186 ntBASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.98■□□□□ 0.95
LRRTM4Q86VH4 AC022517.1-201ENST00000592429 346 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms