Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 MIR3648-2-201ENST00000581792 180 ntBASIC18.66■□□□□ 0.58
CCDC190Q86UF4 AC104564.3-201ENST00000582367 638 ntBASIC18.66■□□□□ 0.58
CCDC190Q86UF4 MIR3648-1-201ENST00000615959 180 ntBASIC18.66■□□□□ 0.58
CCDC190Q86UF4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC190Q86UF4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 C17orf82-201ENST00000623772 1530 ntBASIC18.65■□□□□ 0.58
CCDC190Q86UF4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 ZNRF2P2-203ENST00000454624 420 ntBASIC18.65■□□□□ 0.58
CCDC190Q86UF4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC190Q86UF4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CCDC190Q86UF4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CCDC190Q86UF4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.64■□□□□ 0.58
CCDC190Q86UF4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC190Q86UF4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC190Q86UF4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC190Q86UF4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC190Q86UF4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC190Q86UF4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC190Q86UF4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC190Q86UF4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC190Q86UF4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC190Q86UF4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC190Q86UF4 SMG8-203ENST00000578922 2178 ntBASIC18.64■□□□□ 0.57
CCDC190Q86UF4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 AC004448.1-201ENST00000458332 883 ntBASIC18.63■□□□□ 0.57
CCDC190Q86UF4 AC009086.3-201ENST00000623486 1008 ntBASIC18.63■□□□□ 0.57
CCDC190Q86UF4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 BX323043.1-201ENST00000641006 1765 ntBASIC18.63■□□□□ 0.57
CCDC190Q86UF4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC190Q86UF4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 AC018445.3-201ENST00000624177 1945 ntBASIC18.62■□□□□ 0.57
CCDC190Q86UF4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC190Q86UF4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 FP325331.1-202ENST00000623531 1380 ntBASIC18.61■□□□□ 0.57
CCDC190Q86UF4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms