Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.61■□□□□ 0.73
CHMP1BQ7LBR1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP1BQ7LBR1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMP1BQ7LBR1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP1BQ7LBR1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP1BQ7LBR1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.61■□□□□ 0.73
CHMP1BQ7LBR1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHMP1BQ7LBR1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHMP1BQ7LBR1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 AC097381.1-201ENST00000429019 1296 ntBASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 MIR6821-201ENST00000617625 74 ntBASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 DUSP8P3-201ENST00000399571 1760 ntBASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP1BQ7LBR1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CHMP1BQ7LBR1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP1BQ7LBR1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
CHMP1BQ7LBR1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP1BQ7LBR1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.58■□□□□ 0.73
CHMP1BQ7LBR1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.58■□□□□ 0.73
CHMP1BQ7LBR1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP1BQ7LBR1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CHMP1BQ7LBR1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 AL031602.1-201ENST00000633169 911 ntBASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP1BQ7LBR1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 AC026271.2-201ENST00000428091 497 ntBASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 MIR6084-201ENST00000622012 110 ntBASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP1BQ7LBR1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP1BQ7LBR1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms