Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 BX005040.4-201ENST00000637145 1518 ntBASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COLCA1Q6ZS62 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COLCA1Q6ZS62 AC003102.1-202ENST00000563394 1796 ntBASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 AL354811.1-201ENST00000610286 706 ntBASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
COLCA1Q6ZS62 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 AC055733.4-201ENST00000638462 1354 ntBASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 AC104564.3-201ENST00000582367 638 ntBASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COLCA1Q6ZS62 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.46■□□□□ 0.54
COLCA1Q6ZS62 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 AL358852.1-201ENST00000623174 1268 ntBASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.45■□□□□ 0.54
COLCA1Q6ZS62 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 AC105265.2-201ENST00000467189 838 ntBASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 AC005224.4-201ENST00000583262 1652 ntBASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COLCA1Q6ZS62 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 IRS3P-201ENST00000223076 1006 ntBASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
COLCA1Q6ZS62 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms