Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PACS1Q6VY07 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.6■■□□□ 1.05
PACS1Q6VY07 AC005229.4-201ENST00000610085 2198 ntBASIC21.6■■□□□ 1.05
PACS1Q6VY07 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PACS1Q6VY07 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PACS1Q6VY07 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PACS1Q6VY07 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PACS1Q6VY07 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
PACS1Q6VY07 AC233992.3-201ENST00000607491 485 ntBASIC21.6■■□□□ 1.05
PACS1Q6VY07 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
PACS1Q6VY07 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PACS1Q6VY07 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PACS1Q6VY07 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PACS1Q6VY07 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PACS1Q6VY07 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.59■■□□□ 1.05
PACS1Q6VY07 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PACS1Q6VY07 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.59■■□□□ 1.05
PACS1Q6VY07 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PACS1Q6VY07 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
PACS1Q6VY07 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PACS1Q6VY07 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PACS1Q6VY07 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PACS1Q6VY07 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PACS1Q6VY07 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.59■■□□□ 1.05
PACS1Q6VY07 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PACS1Q6VY07 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.59■■□□□ 1.05
PACS1Q6VY07 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PACS1Q6VY07 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PACS1Q6VY07 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PACS1Q6VY07 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.58■■□□□ 1.05
PACS1Q6VY07 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PACS1Q6VY07 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PACS1Q6VY07 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PACS1Q6VY07 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.58■■□□□ 1.05
PACS1Q6VY07 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.58■■□□□ 1.05
PACS1Q6VY07 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PACS1Q6VY07 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PACS1Q6VY07 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.58■■□□□ 1.05
PACS1Q6VY07 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.58■■□□□ 1.05
PACS1Q6VY07 AC087239.1-201ENST00000622671 572 ntBASIC21.58■■□□□ 1.05
PACS1Q6VY07 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PACS1Q6VY07 Z98882.1-201ENST00000622160 2253 ntBASIC21.58■■□□□ 1.04
PACS1Q6VY07 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.58■■□□□ 1.04
PACS1Q6VY07 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.57■■□□□ 1.04
PACS1Q6VY07 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS1Q6VY07 AC026471.6-201ENST00000622954 1905 ntBASIC21.57■■□□□ 1.04
PACS1Q6VY07 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PACS1Q6VY07 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS1Q6VY07 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS1Q6VY07 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PACS1Q6VY07 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PACS1Q6VY07 AP001330.3-201ENST00000520123 633 ntBASIC21.57■■□□□ 1.04
PACS1Q6VY07 AC027682.1-201ENST00000562846 899 ntBASIC21.57■■□□□ 1.04
PACS1Q6VY07 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PACS1Q6VY07 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.57■■□□□ 1.04
PACS1Q6VY07 AL355001.2-201ENST00000620617 1191 ntBASIC21.57■■□□□ 1.04
PACS1Q6VY07 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
PACS1Q6VY07 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS1Q6VY07 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PACS1Q6VY07 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.56■■□□□ 1.04
PACS1Q6VY07 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PACS1Q6VY07 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PACS1Q6VY07 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
PACS1Q6VY07 AC010141.3-201ENST00000456659 717 ntBASIC21.56■■□□□ 1.04
PACS1Q6VY07 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PACS1Q6VY07 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PACS1Q6VY07 AL031432.3-201ENST00000607698 485 ntBASIC21.56■■□□□ 1.04
PACS1Q6VY07 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.56■■□□□ 1.04
PACS1Q6VY07 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PACS1Q6VY07 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PACS1Q6VY07 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PACS1Q6VY07 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PACS1Q6VY07 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.55■■□□□ 1.04
PACS1Q6VY07 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PACS1Q6VY07 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS1Q6VY07 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PACS1Q6VY07 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.55■■□□□ 1.04
PACS1Q6VY07 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.55■■□□□ 1.04
PACS1Q6VY07 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.55■■□□□ 1.04
PACS1Q6VY07 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.55■■□□□ 1.04
PACS1Q6VY07 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.55■■□□□ 1.04
PACS1Q6VY07 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS1Q6VY07 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS1Q6VY07 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PACS1Q6VY07 OR7E47P-201ENST00000546390 1422 ntBASIC21.55■■□□□ 1.04
PACS1Q6VY07 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PACS1Q6VY07 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.54■■□□□ 1.04
PACS1Q6VY07 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PACS1Q6VY07 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PACS1Q6VY07 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.54■■□□□ 1.04
PACS1Q6VY07 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.54■■□□□ 1.04
PACS1Q6VY07 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PACS1Q6VY07 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.54■■□□□ 1.04
PACS1Q6VY07 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PACS1Q6VY07 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PACS1Q6VY07 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.54■■□□□ 1.04
PACS1Q6VY07 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PACS1Q6VY07 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PACS1Q6VY07 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PACS1Q6VY07 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms