Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-DQA1Q5Y7H0 AC092053.2-201ENST00000640557 1818 ntBASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 YBX1P1-201ENST00000445822 960 ntBASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HLA-DQA1Q5Y7H0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HLA-DQA1Q5Y7H0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA1Q5Y7H0 ECEL1P1-201ENST00000373592 1742 ntBASIC19.91■□□□□ 0.78
HLA-DQA1Q5Y7H0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA1Q5Y7H0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA1Q5Y7H0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-DQA1Q5Y7H0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DQA1Q5Y7H0 LINC02228-203ENST00000641970 1355 ntBASIC19.91■□□□□ 0.78
HLA-DQA1Q5Y7H0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HLA-DQA1Q5Y7H0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 AC123595.1-201ENST00000440769 1046 ntBASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DQA1Q5Y7H0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HLA-DQA1Q5Y7H0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA1Q5Y7H0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA1Q5Y7H0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA1Q5Y7H0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA1Q5Y7H0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA1Q5Y7H0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DQA1Q5Y7H0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DQA1Q5Y7H0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DQA1Q5Y7H0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 MIR935-201ENST00000401179 91 ntBASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DQA1Q5Y7H0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms