Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 H19-210ENST00000439725 1929 ntTSL 2 BASIC35.52■■■■□ 3.28
SNAPC4Q5SXM2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
SNAPC4Q5SXM2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
SNAPC4Q5SXM2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
SNAPC4Q5SXM2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
SNAPC4Q5SXM2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC35.52■■■■□ 3.28
SNAPC4Q5SXM2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
SNAPC4Q5SXM2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC35.51■■■■□ 3.28
SNAPC4Q5SXM2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC35.51■■■■□ 3.28
SNAPC4Q5SXM2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
SNAPC4Q5SXM2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC35.51■■■■□ 3.28
SNAPC4Q5SXM2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
SNAPC4Q5SXM2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
SNAPC4Q5SXM2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
SNAPC4Q5SXM2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC35.5■■■■□ 3.27
SNAPC4Q5SXM2 FAM210CP-201ENST00000445714 574 ntBASIC35.5■■■■□ 3.27
SNAPC4Q5SXM2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC35.5■■■■□ 3.27
SNAPC4Q5SXM2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
SNAPC4Q5SXM2 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC35.5■■■■□ 3.27
SNAPC4Q5SXM2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
SNAPC4Q5SXM2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
SNAPC4Q5SXM2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC35.49■■■■□ 3.27
SNAPC4Q5SXM2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC35.49■■■■□ 3.27
SNAPC4Q5SXM2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC35.49■■■■□ 3.27
SNAPC4Q5SXM2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
SNAPC4Q5SXM2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
SNAPC4Q5SXM2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC35.49■■■■□ 3.27
SNAPC4Q5SXM2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
SNAPC4Q5SXM2 AC138932.3-201ENST00000567634 1902 ntBASIC35.49■■■■□ 3.27
SNAPC4Q5SXM2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 UBE2SP1-201ENST00000450587 669 ntBASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 AC008403.3-201ENST00000598924 454 ntBASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 AC010331.1-201ENST00000611423 582 ntBASIC35.48■■■■□ 3.27
SNAPC4Q5SXM2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
SNAPC4Q5SXM2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
SNAPC4Q5SXM2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC35.47■■■■□ 3.27
SNAPC4Q5SXM2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC35.47■■■■□ 3.27
SNAPC4Q5SXM2 MAX-217ENST00000557277 728 ntTSL 3 BASIC35.47■■■■□ 3.27
SNAPC4Q5SXM2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC35.47■■■■□ 3.27
SNAPC4Q5SXM2 MIR4497-201ENST00000583208 89 ntBASIC35.47■■■■□ 3.27
SNAPC4Q5SXM2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
SNAPC4Q5SXM2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
SNAPC4Q5SXM2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
SNAPC4Q5SXM2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC35.45■■■■□ 3.27
SNAPC4Q5SXM2 OR2A1-AS1-201ENST00000462305 773 ntBASIC35.45■■■■□ 3.27
SNAPC4Q5SXM2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC35.45■■■■□ 3.27
SNAPC4Q5SXM2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC35.45■■■■□ 3.27
SNAPC4Q5SXM2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC35.45■■■■□ 3.27
SNAPC4Q5SXM2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
SNAPC4Q5SXM2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
SNAPC4Q5SXM2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC35.44■■■■□ 3.26
SNAPC4Q5SXM2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC35.44■■■■□ 3.26
SNAPC4Q5SXM2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
SNAPC4Q5SXM2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC35.44■■■■□ 3.26
SNAPC4Q5SXM2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC35.44■■■■□ 3.26
SNAPC4Q5SXM2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
SNAPC4Q5SXM2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC35.44■■■■□ 3.26
SNAPC4Q5SXM2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
SNAPC4Q5SXM2 AC142381.3-201ENST00000568208 1670 ntBASIC35.43■■■■□ 3.26
SNAPC4Q5SXM2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC35.43■■■■□ 3.26
SNAPC4Q5SXM2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC35.43■■■■□ 3.26
SNAPC4Q5SXM2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC35.43■■■■□ 3.26
SNAPC4Q5SXM2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC35.43■■■■□ 3.26
SNAPC4Q5SXM2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
SNAPC4Q5SXM2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC35.43■■■■□ 3.26
SNAPC4Q5SXM2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 GXYLT1P3-201ENST00000453058 1193 ntBASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 AC053503.5-201ENST00000601508 636 ntBASIC35.42■■■■□ 3.26
SNAPC4Q5SXM2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms