Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.03■□□□□ 0.96
CACNA1EQ15878 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.03■□□□□ 0.96
CACNA1EQ15878 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.03■□□□□ 0.96
CACNA1EQ15878 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CACNA1EQ15878 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA1EQ15878 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA1EQ15878 AL512625.2-201ENST00000417533 625 ntBASIC21.02■□□□□ 0.96
CACNA1EQ15878 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.02■□□□□ 0.96
CACNA1EQ15878 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CACNA1EQ15878 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CACNA1EQ15878 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CACNA1EQ15878 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CACNA1EQ15878 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
CACNA1EQ15878 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.01■□□□□ 0.95
CACNA1EQ15878 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CACNA1EQ15878 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA1EQ15878 KRT18P29-201ENST00000397031 1267 ntBASIC21.01■□□□□ 0.95
CACNA1EQ15878 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.01■□□□□ 0.95
CACNA1EQ15878 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.01■□□□□ 0.95
CACNA1EQ15878 AL162412.1-201ENST00000567129 965 ntBASIC21.01■□□□□ 0.95
CACNA1EQ15878 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.01■□□□□ 0.95
CACNA1EQ15878 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA1EQ15878 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA1EQ15878 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA1EQ15878 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.01■□□□□ 0.95
CACNA1EQ15878 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.01■□□□□ 0.95
CACNA1EQ15878 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA1EQ15878 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA1EQ15878 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CACNA1EQ15878 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA1EQ15878 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21■□□□□ 0.95
CACNA1EQ15878 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21■□□□□ 0.95
CACNA1EQ15878 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CACNA1EQ15878 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21■□□□□ 0.95
CACNA1EQ15878 OR10C1-204ENST00000622521 1039 ntBASIC21■□□□□ 0.95
CACNA1EQ15878 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21■□□□□ 0.95
CACNA1EQ15878 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA1EQ15878 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA1EQ15878 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21■□□□□ 0.95
CACNA1EQ15878 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA1EQ15878 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21■□□□□ 0.95
CACNA1EQ15878 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA1EQ15878 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA1EQ15878 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21■□□□□ 0.95
CACNA1EQ15878 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21■□□□□ 0.95
CACNA1EQ15878 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21■□□□□ 0.95
CACNA1EQ15878 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21■□□□□ 0.95
CACNA1EQ15878 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21■□□□□ 0.95
CACNA1EQ15878 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CACNA1EQ15878 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA1EQ15878 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.99■□□□□ 0.95
CACNA1EQ15878 TERF1P5-201ENST00000477545 1207 ntBASIC20.99■□□□□ 0.95
CACNA1EQ15878 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA1EQ15878 AC079089.2-201ENST00000531211 1277 ntBASIC20.99■□□□□ 0.95
CACNA1EQ15878 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1EQ15878 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA1EQ15878 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1EQ15878 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1EQ15878 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1EQ15878 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA1EQ15878 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CACNA1EQ15878 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA1EQ15878 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA1EQ15878 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA1EQ15878 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA1EQ15878 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.98■□□□□ 0.95
CACNA1EQ15878 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CACNA1EQ15878 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA1EQ15878 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CACNA1EQ15878 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
CACNA1EQ15878 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.98■□□□□ 0.95
CACNA1EQ15878 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA1EQ15878 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.98■□□□□ 0.95
CACNA1EQ15878 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.98■□□□□ 0.95
CACNA1EQ15878 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.98■□□□□ 0.95
CACNA1EQ15878 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA1EQ15878 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CACNA1EQ15878 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.97■□□□□ 0.95
CACNA1EQ15878 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.97■□□□□ 0.95
CACNA1EQ15878 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CACNA1EQ15878 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.97■□□□□ 0.95
CACNA1EQ15878 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA1EQ15878 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA1EQ15878 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA1EQ15878 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA1EQ15878 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CACNA1EQ15878 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA1EQ15878 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.96■□□□□ 0.95
CACNA1EQ15878 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA1EQ15878 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA1EQ15878 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA1EQ15878 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.96■□□□□ 0.95
CACNA1EQ15878 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA1EQ15878 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA1EQ15878 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.96■□□□□ 0.95
CACNA1EQ15878 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
CACNA1EQ15878 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA1EQ15878 AC092118.2-201ENST00000613495 667 ntBASIC20.96■□□□□ 0.95
CACNA1EQ15878 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA1EQ15878 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms