Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 tL(UAG)L2tL(UAG)L2 82 nt1.96□□□□□ -2.1
LSM6Q06406 PEF1YGR058W 1008 nt1.96□□□□□ -2.1
LSM6Q06406 SIC1YLR079W 855 nt1.96□□□□□ -2.1
LSM6Q06406 MST28YAR033W 705 nt1.96□□□□□ -2.1
LSM6Q06406 AAR2YBL074C 1068 nt1.96□□□□□ -2.1
LSM6Q06406 ATP3YBR039W 936 nt1.96□□□□□ -2.1
LSM6Q06406 FES1YBR101C 873 nt1.96□□□□□ -2.1
LSM6Q06406 UBP8YMR223W 1416 nt1.96□□□□□ -2.1
LSM6Q06406 SPP382YLR424W 2127 nt1.96□□□□□ -2.1
LSM6Q06406 MYO5YMR109W 3660 nt1.95□□□□□ -2.1
LSM6Q06406 YDR098C-BYDR098C-B 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YDR210C-DYDR210C-D 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YDR316W-BYDR316W-B 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YDR365W-BYDR365W-B 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YER138CYER138C 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YER160CYER160C 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YGR038C-BYGR038C-B 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YGR161C-DYGR161C-D 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YJR027WYJR027W 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YLR157C-BYLR157C-B 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YLR227W-BYLR227W-B 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YML039WYML039W 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YML045WYML045W 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YMR050CYMR050C 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YOL103W-BYOL103W-B 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YBR012W-BYBR012W-B 5271 nt1.95□□□□□ -2.1
LSM6Q06406 YOR142W-BYOR142W-B 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YPL257W-BYPL257W-B 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YPR158C-DYPR158C-D 5268 nt1.95□□□□□ -2.1
LSM6Q06406 YPR158W-BYPR158W-B 5271 nt1.95□□□□□ -2.1
LSM6Q06406 PBS2YJL128C 2007 nt1.95□□□□□ -2.1
LSM6Q06406 YDR249CYDR249C 1122 nt1.95□□□□□ -2.1
LSM6Q06406 SPT2YER161C 1002 nt1.95□□□□□ -2.1
LSM6Q06406 YIL047C-AYIL047C-A 369 nt1.95□□□□□ -2.1
LSM6Q06406 PIR1YKL164C 1026 nt1.95□□□□□ -2.1
LSM6Q06406 MIC27YNL100W 705 nt1.95□□□□□ -2.1
LSM6Q06406 INO4YOL108C 456 nt1.95□□□□□ -2.1
LSM6Q06406 NME1NME1 340 nt1.95□□□□□ -2.1
LSM6Q06406 SPN1YPR133C 1233 nt1.95□□□□□ -2.1
LSM6Q06406 ARO4YBR249C 1113 nt1.95□□□□□ -2.1
LSM6Q06406 YGL176CYGL176C 1665 nt1.95□□□□□ -2.1
LSM6Q06406 NPL4YBR170C 1743 nt1.94□□□□□ -2.1
LSM6Q06406 IRA2YOL081W 9240 nt1.94□□□□□ -2.1
LSM6Q06406 GRX6YDL010W 696 nt1.94□□□□□ -2.1
LSM6Q06406 PDS1YDR113C 1122 nt1.94□□□□□ -2.1
LSM6Q06406 CLC1YGR167W 702 nt1.94□□□□□ -2.1
LSM6Q06406 CDC12YHR107C 1224 nt1.94□□□□□ -2.1
LSM6Q06406 DAD3YBR233W-A 285 nt1.94□□□□□ -2.1
LSM6Q06406 PDC2YDR081C 2778 nt1.94□□□□□ -2.1
LSM6Q06406 YPL109CYPL109C 1974 nt1.94□□□□□ -2.1
LSM6Q06406 STE6YKL209C 3873 nt1.93□□□□□ -2.1
LSM6Q06406 RIM13YMR154C 2184 nt1.93□□□□□ -2.1
LSM6Q06406 CLD1YGR110W 1338 nt1.93□□□□□ -2.1
LSM6Q06406 TMA64YDR117C 1698 nt1.93□□□□□ -2.1
LSM6Q06406 GCD10YNL062C 1437 nt1.93□□□□□ -2.1
LSM6Q06406 GEA1YJR031C 4227 nt1.93□□□□□ -2.1
LSM6Q06406 CUE3YGL110C 1875 nt1.93□□□□□ -2.1
LSM6Q06406 GTF1YGR102C 552 nt1.93□□□□□ -2.1
LSM6Q06406 MRPS35YGR165W 1038 nt1.93□□□□□ -2.1
LSM6Q06406 YKR070WYKR070W 1059 nt1.93□□□□□ -2.1
LSM6Q06406 SAS2YMR127C 1017 nt1.93□□□□□ -2.1
LSM6Q06406 YBL039W-BYBL039W-B 180 nt1.93□□□□□ -2.1
LSM6Q06406 MRPL33YMR286W 261 nt1.93□□□□□ -2.1
LSM6Q06406 POS5YPL188W 1245 nt1.93□□□□□ -2.1
LSM6Q06406 PSD2YGR170W 3417 nt1.92□□□□□ -2.1
LSM6Q06406 ARP8YOR141C 2646 nt1.92□□□□□ -2.1
LSM6Q06406 INO2YDR123C 915 nt1.92□□□□□ -2.1
LSM6Q06406 HAT2YEL056W 1206 nt1.92□□□□□ -2.1
LSM6Q06406 ERG20YJL167W 1059 nt1.92□□□□□ -2.1
LSM6Q06406 RAS1YOR101W 930 nt1.92□□□□□ -2.1
LSM6Q06406 RPO41YFL036W 4056 nt1.92□□□□□ -2.1
LSM6Q06406 TOR1YJR066W 7413 nt1.91□□□□□ -2.1
LSM6Q06406 UTP14YML093W 2700 nt1.91□□□□□ -2.1
LSM6Q06406 IKI3YLR384C 4050 nt1.91□□□□□ -2.1
LSM6Q06406 NEW1YPL226W 3591 nt1.91□□□□□ -2.1
LSM6Q06406 TOM70YNL121C 1854 nt1.91□□□□□ -2.1
LSM6Q06406 YPK3YBR028C 1578 nt1.91□□□□□ -2.1
LSM6Q06406 RPL1BYGL135W 654 nt1.91□□□□□ -2.1
LSM6Q06406 YLR154W-EYLR154W-E 204 nt1.91□□□□□ -2.1
LSM6Q06406 YMR187CYMR187C 1296 nt1.91□□□□□ -2.1
LSM6Q06406 RLP7YNL002C 969 nt1.91□□□□□ -2.1
LSM6Q06406 YNR042WYNR042W 429 nt1.91□□□□□ -2.1
LSM6Q06406 RPS11BYBR048W 471 nt1.91□□□□□ -2.1
LSM6Q06406 RPL1AYPL220W 654 nt1.91□□□□□ -2.1
LSM6Q06406 SIR3YLR442C 2937 nt1.91□□□□□ -2.1
LSM6Q06406 DNL4YOR005C 2835 nt1.91□□□□□ -2.1
LSM6Q06406 NAB3YPL190C 2409 nt1.91□□□□□ -2.1
LSM6Q06406 SVL3YPL032C 2478 nt1.91□□□□□ -2.1
LSM6Q06406 DXO1YDR370C 1329 nt1.91□□□□□ -2.1
LSM6Q06406 SEC26YDR238C 2922 nt1.9□□□□□ -2.1
LSM6Q06406 ROG1YGL144C 2058 nt1.9□□□□□ -2.1
LSM6Q06406 VPS30YPL120W 1674 nt1.9□□□□□ -2.1
LSM6Q06406 HPA3YEL066W 540 nt1.9□□□□□ -2.11
LSM6Q06406 YGR160WYGR160W 612 nt1.9□□□□□ -2.11
LSM6Q06406 YHL006W-AYHL006W-A 354 nt1.9□□□□□ -2.11
LSM6Q06406 BET3YKR068C 582 nt1.9□□□□□ -2.11
LSM6Q06406 ENV10YLR065C 546 nt1.9□□□□□ -2.11
LSM6Q06406 NDL1YLR254C 570 nt1.9□□□□□ -2.11
LSM6Q06406 JIP3YLR331C 378 nt1.9□□□□□ -2.11
LSM6Q06406 SMA2YML066C 1110 nt1.9□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms