Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-1P78426 OXCT2P1-201ENST00000447263 1535 ntBASIC18.78■□□□□ 0.6
NKX6-1P78426 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-1P78426 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NKX6-1P78426 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-1P78426 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-1P78426 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-1P78426 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-1P78426 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NKX6-1P78426 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NKX6-1P78426 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-1P78426 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NKX6-1P78426 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.77■□□□□ 0.6
NKX6-1P78426 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.77■□□□□ 0.6
NKX6-1P78426 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-1P78426 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-1P78426 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-1P78426 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NKX6-1P78426 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NKX6-1P78426 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
NKX6-1P78426 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NKX6-1P78426 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NKX6-1P78426 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.76■□□□□ 0.59
NKX6-1P78426 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.76■□□□□ 0.59
NKX6-1P78426 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.76■□□□□ 0.59
NKX6-1P78426 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.76■□□□□ 0.59
NKX6-1P78426 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.76■□□□□ 0.59
NKX6-1P78426 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.76■□□□□ 0.59
NKX6-1P78426 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.76■□□□□ 0.59
NKX6-1P78426 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.76■□□□□ 0.59
NKX6-1P78426 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.76■□□□□ 0.59
NKX6-1P78426 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 AC104771.1-201ENST00000603335 964 ntBASIC18.76■□□□□ 0.59
NKX6-1P78426 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.76■□□□□ 0.59
NKX6-1P78426 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NKX6-1P78426 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.76■□□□□ 0.59
NKX6-1P78426 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-1P78426 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-1P78426 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-1P78426 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-1P78426 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-1P78426 ABHD17AP1-201ENST00000358206 933 ntBASIC18.75■□□□□ 0.59
NKX6-1P78426 AC006970.2-201ENST00000450065 779 ntBASIC18.75■□□□□ 0.59
NKX6-1P78426 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.75■□□□□ 0.59
NKX6-1P78426 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.75■□□□□ 0.59
NKX6-1P78426 BID-214ENST00000617586 542 ntTSL 5 BASIC18.75■□□□□ 0.59
NKX6-1P78426 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.75■□□□□ 0.59
NKX6-1P78426 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-1P78426 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NKX6-1P78426 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NKX6-1P78426 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX6-1P78426 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-1P78426 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 AL355802.2-201ENST00000402069 882 ntBASIC18.74■□□□□ 0.59
NKX6-1P78426 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.74■□□□□ 0.59
NKX6-1P78426 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-1P78426 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-1P78426 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
NKX6-1P78426 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-1P78426 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-1P78426 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-1P78426 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
NKX6-1P78426 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX6-1P78426 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.73■□□□□ 0.59
NKX6-1P78426 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX6-1P78426 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX6-1P78426 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX6-1P78426 AL109923.1-201ENST00000618799 583 ntBASIC18.73■□□□□ 0.59
NKX6-1P78426 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NKX6-1P78426 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NKX6-1P78426 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-1P78426 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms