Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDH11P55287 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CDH11P55287 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDH11P55287 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH11P55287 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH11P55287 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH11P55287 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CDH11P55287 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH11P55287 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH11P55287 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH11P55287 SERBP1P1-201ENST00000396021 1160 ntBASIC19.51■□□□□ 0.71
CDH11P55287 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH11P55287 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CDH11P55287 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH11P55287 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.51■□□□□ 0.71
CDH11P55287 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
CDH11P55287 AL031432.3-201ENST00000607698 485 ntBASIC19.51■□□□□ 0.71
CDH11P55287 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH11P55287 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH11P55287 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH11P55287 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.51■□□□□ 0.71
CDH11P55287 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH11P55287 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH11P55287 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 MIR4767-201ENST00000582827 78 ntBASIC19.5■□□□□ 0.71
CDH11P55287 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.5■□□□□ 0.71
CDH11P55287 AC241377.3-202ENST00000626088 1088 ntBASIC19.5■□□□□ 0.71
CDH11P55287 AC241585.3-202ENST00000628937 1088 ntBASIC19.5■□□□□ 0.71
CDH11P55287 AC245100.8-202ENST00000629247 1058 ntBASIC19.5■□□□□ 0.71
CDH11P55287 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CDH11P55287 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH11P55287 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH11P55287 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH11P55287 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH11P55287 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CDH11P55287 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CDH11P55287 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDH11P55287 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 AF213884.3-201ENST00000563833 479 ntBASIC19.49■□□□□ 0.71
CDH11P55287 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.49■□□□□ 0.71
CDH11P55287 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.49■□□□□ 0.71
CDH11P55287 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDH11P55287 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH11P55287 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH11P55287 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CDH11P55287 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDH11P55287 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH11P55287 SUDS3P1-201ENST00000505831 966 ntBASIC19.48■□□□□ 0.71
CDH11P55287 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH11P55287 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH11P55287 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH11P55287 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH11P55287 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CDH11P55287 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH11P55287 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH11P55287 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CDH11P55287 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH11P55287 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH11P55287 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 AP001330.3-201ENST00000520123 633 ntBASIC19.47■□□□□ 0.71
CDH11P55287 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH11P55287 AL138724.1-201ENST00000606771 1088 ntBASIC19.47■□□□□ 0.71
CDH11P55287 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH11P55287 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CDH11P55287 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH11P55287 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms