Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.9■□□□□ 0.78
PSMD4P55036 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PSMD4P55036 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
PSMD4P55036 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PSMD4P55036 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PSMD4P55036 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PSMD4P55036 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PSMD4P55036 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.89■□□□□ 0.77
PSMD4P55036 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PSMD4P55036 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PSMD4P55036 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.89■□□□□ 0.77
PSMD4P55036 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.89■□□□□ 0.77
PSMD4P55036 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.89■□□□□ 0.77
PSMD4P55036 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PSMD4P55036 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PSMD4P55036 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PSMD4P55036 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.88■□□□□ 0.77
PSMD4P55036 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PSMD4P55036 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.88■□□□□ 0.77
PSMD4P55036 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.88■□□□□ 0.77
PSMD4P55036 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.88■□□□□ 0.77
PSMD4P55036 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.88■□□□□ 0.77
PSMD4P55036 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PSMD4P55036 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.88■□□□□ 0.77
PSMD4P55036 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.88■□□□□ 0.77
PSMD4P55036 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.88■□□□□ 0.77
PSMD4P55036 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PSMD4P55036 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.88■□□□□ 0.77
PSMD4P55036 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.88■□□□□ 0.77
PSMD4P55036 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.88■□□□□ 0.77
PSMD4P55036 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.88■□□□□ 0.77
PSMD4P55036 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PSMD4P55036 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PSMD4P55036 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PSMD4P55036 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PSMD4P55036 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PSMD4P55036 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.87■□□□□ 0.77
PSMD4P55036 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PSMD4P55036 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.87■□□□□ 0.77
PSMD4P55036 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PSMD4P55036 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.87■□□□□ 0.77
PSMD4P55036 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PSMD4P55036 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.87■□□□□ 0.77
PSMD4P55036 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PSMD4P55036 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PSMD4P55036 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.87■□□□□ 0.77
PSMD4P55036 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.87■□□□□ 0.77
PSMD4P55036 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.87■□□□□ 0.77
PSMD4P55036 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PSMD4P55036 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PSMD4P55036 LINC00565-201ENST00000562710 2331 ntBASIC19.87■□□□□ 0.77
PSMD4P55036 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.87■□□□□ 0.77
PSMD4P55036 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.86■□□□□ 0.77
PSMD4P55036 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 AC105265.2-201ENST00000467189 838 ntBASIC19.86■□□□□ 0.77
PSMD4P55036 SMUG1P1-201ENST00000590640 811 ntBASIC19.86■□□□□ 0.77
PSMD4P55036 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.86■□□□□ 0.77
PSMD4P55036 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PSMD4P55036 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
PSMD4P55036 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PSMD4P55036 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PSMD4P55036 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
PSMD4P55036 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PSMD4P55036 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
PSMD4P55036 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PSMD4P55036 AP004607.7-201ENST00000527152 1677 ntBASIC19.85■□□□□ 0.77
PSMD4P55036 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PSMD4P55036 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PSMD4P55036 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
PSMD4P55036 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PSMD4P55036 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.85■□□□□ 0.77
PSMD4P55036 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PSMD4P55036 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.85■□□□□ 0.77
PSMD4P55036 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.85■□□□□ 0.77
PSMD4P55036 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
PSMD4P55036 AL354811.1-201ENST00000610286 706 ntBASIC19.85■□□□□ 0.77
PSMD4P55036 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.85■□□□□ 0.77
PSMD4P55036 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PSMD4P55036 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.85■□□□□ 0.77
PSMD4P55036 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PSMD4P55036 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PSMD4P55036 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PSMD4P55036 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PSMD4P55036 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PSMD4P55036 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PSMD4P55036 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms