Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
HMGCS2P54868 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.9■■□□□ 1.58
HMGCS2P54868 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
HMGCS2P54868 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.89■■□□□ 1.58
HMGCS2P54868 AC073210.2-201ENST00000430369 194 ntBASIC24.89■■□□□ 1.58
HMGCS2P54868 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.89■■□□□ 1.58
HMGCS2P54868 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
HMGCS2P54868 AC066615.1-201ENST00000640911 628 ntBASIC24.89■■□□□ 1.58
HMGCS2P54868 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
HMGCS2P54868 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.89■■□□□ 1.57
HMGCS2P54868 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
HMGCS2P54868 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
HMGCS2P54868 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
HMGCS2P54868 AC068338.2-201ENST00000563278 1430 ntBASIC24.88■■□□□ 1.57
HMGCS2P54868 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HMGCS2P54868 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
HMGCS2P54868 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
HMGCS2P54868 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HMGCS2P54868 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.88■■□□□ 1.57
HMGCS2P54868 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
HMGCS2P54868 CYP2T1P-201ENST00000432607 1285 ntBASIC24.88■■□□□ 1.57
HMGCS2P54868 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.88■■□□□ 1.57
HMGCS2P54868 SLC7A5P1-201ENST00000568957 537 ntBASIC24.88■■□□□ 1.57
HMGCS2P54868 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HMGCS2P54868 AC053503.5-201ENST00000601508 636 ntBASIC24.88■■□□□ 1.57
HMGCS2P54868 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.88■■□□□ 1.57
HMGCS2P54868 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
HMGCS2P54868 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
HMGCS2P54868 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
HMGCS2P54868 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.88■■□□□ 1.57
HMGCS2P54868 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
HMGCS2P54868 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
HMGCS2P54868 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.87■■□□□ 1.57
HMGCS2P54868 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
HMGCS2P54868 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HMGCS2P54868 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.87■■□□□ 1.57
HMGCS2P54868 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.87■■□□□ 1.57
HMGCS2P54868 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
HMGCS2P54868 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
HMGCS2P54868 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
HMGCS2P54868 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HMGCS2P54868 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HMGCS2P54868 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.86■■□□□ 1.57
HMGCS2P54868 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
HMGCS2P54868 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.86■■□□□ 1.57
HMGCS2P54868 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
HMGCS2P54868 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
HMGCS2P54868 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HMGCS2P54868 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HMGCS2P54868 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
HMGCS2P54868 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.85■■□□□ 1.57
HMGCS2P54868 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.85■■□□□ 1.57
HMGCS2P54868 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
HMGCS2P54868 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HMGCS2P54868 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
HMGCS2P54868 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HMGCS2P54868 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.84■■□□□ 1.57
HMGCS2P54868 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
HMGCS2P54868 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
HMGCS2P54868 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.84■■□□□ 1.57
HMGCS2P54868 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.84■■□□□ 1.57
HMGCS2P54868 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.84■■□□□ 1.57
HMGCS2P54868 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HMGCS2P54868 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
HMGCS2P54868 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.83■■□□□ 1.57
HMGCS2P54868 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.83■■□□□ 1.57
HMGCS2P54868 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
HMGCS2P54868 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HMGCS2P54868 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HMGCS2P54868 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HMGCS2P54868 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.83■■□□□ 1.57
HMGCS2P54868 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.83■■□□□ 1.57
HMGCS2P54868 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.83■■□□□ 1.57
HMGCS2P54868 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.83■■□□□ 1.57
HMGCS2P54868 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HMGCS2P54868 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.56
HMGCS2P54868 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
HMGCS2P54868 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.56
HMGCS2P54868 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
HMGCS2P54868 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
HMGCS2P54868 FAM201B-201ENST00000458407 597 ntBASIC24.82■■□□□ 1.56
HMGCS2P54868 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.82■■□□□ 1.56
HMGCS2P54868 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.82■■□□□ 1.56
HMGCS2P54868 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.82■■□□□ 1.56
HMGCS2P54868 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.82■■□□□ 1.56
HMGCS2P54868 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
HMGCS2P54868 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.82■■□□□ 1.56
HMGCS2P54868 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.82■■□□□ 1.56
HMGCS2P54868 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
HMGCS2P54868 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.82■■□□□ 1.56
HMGCS2P54868 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HMGCS2P54868 MKRN4P-201ENST00000444706 1521 ntBASIC24.81■■□□□ 1.56
HMGCS2P54868 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
HMGCS2P54868 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HMGCS2P54868 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HMGCS2P54868 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HMGCS2P54868 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HMGCS2P54868 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.81■■□□□ 1.56
HMGCS2P54868 MIPEPP3-201ENST00000412105 444 ntBASIC24.81■■□□□ 1.56
HMGCS2P54868 AC007322.4-201ENST00000509611 723 ntBASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms