Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.19■□□□□ 0.66
LHX2P50458 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX2P50458 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX2P50458 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LHX2P50458 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LHX2P50458 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX2P50458 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LHX2P50458 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX2P50458 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX2P50458 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX2P50458 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.18■□□□□ 0.66
LHX2P50458 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX2P50458 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX2P50458 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX2P50458 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX2P50458 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX2P50458 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX2P50458 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX2P50458 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LHX2P50458 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX2P50458 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.17■□□□□ 0.66
LHX2P50458 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LHX2P50458 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX2P50458 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX2P50458 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX2P50458 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX2P50458 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LHX2P50458 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.17■□□□□ 0.66
LHX2P50458 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX2P50458 AC016769.1-201ENST00000409132 1010 ntBASIC19.17■□□□□ 0.66
LHX2P50458 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX2P50458 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX2P50458 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LHX2P50458 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.17■□□□□ 0.66
LHX2P50458 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LHX2P50458 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.17■□□□□ 0.66
LHX2P50458 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
LHX2P50458 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.16■□□□□ 0.66
LHX2P50458 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX2P50458 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.16■□□□□ 0.66
LHX2P50458 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LHX2P50458 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LHX2P50458 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX2P50458 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LHX2P50458 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.16■□□□□ 0.66
LHX2P50458 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.16■□□□□ 0.66
LHX2P50458 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.16■□□□□ 0.66
LHX2P50458 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.16■□□□□ 0.66
LHX2P50458 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LHX2P50458 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.16■□□□□ 0.66
LHX2P50458 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LHX2P50458 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LHX2P50458 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.16■□□□□ 0.66
LHX2P50458 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX2P50458 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LHX2P50458 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX2P50458 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX2P50458 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
LHX2P50458 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX2P50458 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LHX2P50458 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LHX2P50458 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.15■□□□□ 0.66
LHX2P50458 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX2P50458 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.15■□□□□ 0.66
LHX2P50458 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX2P50458 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX2P50458 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX2P50458 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LHX2P50458 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.15■□□□□ 0.66
LHX2P50458 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LHX2P50458 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.66
LHX2P50458 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LHX2P50458 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LHX2P50458 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX2P50458 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.14■□□□□ 0.65
LHX2P50458 EEF1DP3-203ENST00000566025 782 ntBASIC19.14■□□□□ 0.65
LHX2P50458 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.14■□□□□ 0.65
LHX2P50458 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.14■□□□□ 0.65
LHX2P50458 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.14■□□□□ 0.65
LHX2P50458 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LHX2P50458 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX2P50458 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.14■□□□□ 0.65
LHX2P50458 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX2P50458 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX2P50458 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LHX2P50458 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LHX2P50458 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LHX2P50458 AC233723.2-201ENST00000623798 2106 ntBASIC19.13■□□□□ 0.65
LHX2P50458 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LHX2P50458 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX2P50458 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LHX2P50458 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX2P50458 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.13■□□□□ 0.65
LHX2P50458 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX2P50458 AC138907.5-202ENST00000569484 235 ntBASIC19.13■□□□□ 0.65
LHX2P50458 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.13■□□□□ 0.65
LHX2P50458 AP001160.3-201ENST00000601484 763 ntBASIC19.13■□□□□ 0.65
LHX2P50458 RARRES2P11-201ENST00000635158 484 ntBASIC19.13■□□□□ 0.65
LHX2P50458 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LHX2P50458 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms