Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2AP49459 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
UBE2AP49459 GATM-206ENST00000558336 1522 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2AP49459 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2AP49459 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.52□□□□□ -0.25
UBE2AP49459 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2AP49459 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2AP49459 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2AP49459 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2AP49459 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2AP49459 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2AP49459 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBE2AP49459 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 AL121603.2-201ENST00000557373 2117 ntBASIC13.51□□□□□ -0.25
UBE2AP49459 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
UBE2AP49459 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC13.51□□□□□ -0.25
UBE2AP49459 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
UBE2AP49459 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UBE2AP49459 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2AP49459 AC133637.1-201ENST00000624115 1537 ntBASIC13.51□□□□□ -0.25
UBE2AP49459 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBE2AP49459 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.51□□□□□ -0.25
UBE2AP49459 AL499627.2-201ENST00000606283 725 ntBASIC13.51□□□□□ -0.25
UBE2AP49459 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UBE2AP49459 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBE2AP49459 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
UBE2AP49459 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBE2AP49459 AC087742.1-201ENST00000575880 1738 ntBASIC13.5□□□□□ -0.25
UBE2AP49459 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC13.5□□□□□ -0.25
UBE2AP49459 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBE2AP49459 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBE2AP49459 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.5□□□□□ -0.25
UBE2AP49459 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBE2AP49459 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.5□□□□□ -0.25
UBE2AP49459 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
UBE2AP49459 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2AP49459 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBE2AP49459 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBE2AP49459 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2AP49459 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC13.49□□□□□ -0.25
UBE2AP49459 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBE2AP49459 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
UBE2AP49459 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2AP49459 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2AP49459 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
UBE2AP49459 AC087239.1-201ENST00000622671 572 ntBASIC13.49□□□□□ -0.25
UBE2AP49459 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2AP49459 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
UBE2AP49459 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2AP49459 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2AP49459 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2AP49459 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2AP49459 AC137767.1-201ENST00000602918 1920 ntBASIC13.49□□□□□ -0.25
UBE2AP49459 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2AP49459 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2AP49459 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2AP49459 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2AP49459 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2AP49459 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
UBE2AP49459 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2AP49459 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms