Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL138724.1-201ENST00000606771 1088 ntBASIC18.89■□□□□ 0.61
SRP9P49458 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRP9P49458 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
SRP9P49458 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRP9P49458 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SRP9P49458 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SRP9P49458 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SRP9P49458 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRP9P49458 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SRP9P49458 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.89■□□□□ 0.61
SRP9P49458 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SRP9P49458 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.88■□□□□ 0.61
SRP9P49458 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
SRP9P49458 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SRP9P49458 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 AC006455.2-201ENST00000429931 906 ntBASIC18.88■□□□□ 0.61
SRP9P49458 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.88■□□□□ 0.61
SRP9P49458 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.88■□□□□ 0.61
SRP9P49458 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SRP9P49458 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRP9P49458 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SRP9P49458 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.87■□□□□ 0.61
SRP9P49458 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRP9P49458 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.87■□□□□ 0.61
SRP9P49458 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.87■□□□□ 0.61
SRP9P49458 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.87■□□□□ 0.61
SRP9P49458 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP9P49458 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP9P49458 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP9P49458 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP9P49458 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.87■□□□□ 0.61
SRP9P49458 pRNA.6-201ENST00000610482 90 ntBASIC18.87■□□□□ 0.61
SRP9P49458 pRNA.5-201ENST00000612139 90 ntBASIC18.87■□□□□ 0.61
SRP9P49458 pRNA.11-201ENST00000618423 90 ntBASIC18.87■□□□□ 0.61
SRP9P49458 pRNA.13-201ENST00000619112 90 ntBASIC18.87■□□□□ 0.61
SRP9P49458 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.87■□□□□ 0.61
SRP9P49458 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP9P49458 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SRP9P49458 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRP9P49458 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP9P49458 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRP9P49458 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP9P49458 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRP9P49458 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SRP9P49458 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SRP9P49458 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP9P49458 UNC93B3-201ENST00000308076 687 ntBASIC18.86■□□□□ 0.61
SRP9P49458 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP9P49458 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRP9P49458 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.86■□□□□ 0.61
SRP9P49458 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRP9P49458 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRP9P49458 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SRP9P49458 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.86■□□□□ 0.61
SRP9P49458 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SRP9P49458 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP9P49458 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP9P49458 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRP9P49458 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP9P49458 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP9P49458 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRP9P49458 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SRP9P49458 AC096631.2-201ENST00000436136 790 ntBASIC18.85■□□□□ 0.61
SRP9P49458 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRP9P49458 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.85■□□□□ 0.61
SRP9P49458 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SRP9P49458 MIR3181-201ENST00000578512 73 ntBASIC18.85■□□□□ 0.61
SRP9P49458 AL499627.2-201ENST00000606283 725 ntBASIC18.85■□□□□ 0.61
SRP9P49458 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP9P49458 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.85■□□□□ 0.61
SRP9P49458 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.85■□□□□ 0.61
SRP9P49458 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRP9P49458 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SRP9P49458 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SRP9P49458 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SRP9P49458 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 SERBP1P1-201ENST00000396021 1160 ntBASIC18.84■□□□□ 0.61
SRP9P49458 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.84■□□□□ 0.61
SRP9P49458 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.84■□□□□ 0.61
SRP9P49458 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.84■□□□□ 0.61
SRP9P49458 AC011298.3-201ENST00000615796 283 ntBASIC18.84■□□□□ 0.61
SRP9P49458 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.84■□□□□ 0.61
SRP9P49458 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.84■□□□□ 0.61
SRP9P49458 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms