Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AL136116.3-201ENST00000402907 1138 ntBASIC20.71■□□□□ 0.91
KRT6CP48668 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6CP48668 AL034346.1-201ENST00000568244 1277 ntBASIC20.71■□□□□ 0.91
KRT6CP48668 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
KRT6CP48668 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6CP48668 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT6CP48668 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
KRT6CP48668 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
KRT6CP48668 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.71■□□□□ 0.91
KRT6CP48668 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6CP48668 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KRT6CP48668 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT6CP48668 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.71■□□□□ 0.91
KRT6CP48668 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.7■□□□□ 0.91
KRT6CP48668 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT6CP48668 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.7■□□□□ 0.9
KRT6CP48668 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT6CP48668 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT6CP48668 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KRT6CP48668 AC104564.3-201ENST00000582367 638 ntBASIC20.7■□□□□ 0.9
KRT6CP48668 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.7■□□□□ 0.9
KRT6CP48668 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KRT6CP48668 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
KRT6CP48668 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.7■□□□□ 0.9
KRT6CP48668 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
KRT6CP48668 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KRT6CP48668 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
KRT6CP48668 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
KRT6CP48668 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT6CP48668 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KRT6CP48668 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.69■□□□□ 0.9
KRT6CP48668 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
KRT6CP48668 AL137060.1-201ENST00000618151 2648 ntBASIC20.69■□□□□ 0.9
KRT6CP48668 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KRT6CP48668 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
KRT6CP48668 AL121603.2-201ENST00000557373 2117 ntBASIC20.68■□□□□ 0.9
KRT6CP48668 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT6CP48668 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT6CP48668 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT6CP48668 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.68■□□□□ 0.9
KRT6CP48668 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT6CP48668 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.68■□□□□ 0.9
KRT6CP48668 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
KRT6CP48668 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT6CP48668 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KRT6CP48668 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KRT6CP48668 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6CP48668 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6CP48668 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6CP48668 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KRT6CP48668 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6CP48668 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT6CP48668 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6CP48668 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6CP48668 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
KRT6CP48668 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6CP48668 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KRT6CP48668 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KRT6CP48668 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
KRT6CP48668 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.67■□□□□ 0.9
KRT6CP48668 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.66■□□□□ 0.9
KRT6CP48668 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KRT6CP48668 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
KRT6CP48668 AC026471.6-201ENST00000622954 1905 ntBASIC20.66■□□□□ 0.9
KRT6CP48668 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KRT6CP48668 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KRT6CP48668 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.65■□□□□ 0.9
KRT6CP48668 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT6CP48668 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.65■□□□□ 0.9
KRT6CP48668 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.65■□□□□ 0.9
KRT6CP48668 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KRT6CP48668 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms