Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HADHAP40939 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HADHAP40939 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
HADHAP40939 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HADHAP40939 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.63■■□□□ 1.05
HADHAP40939 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.63■■□□□ 1.05
HADHAP40939 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.63■■□□□ 1.05
HADHAP40939 SUDS3P1-201ENST00000505831 966 ntBASIC21.63■■□□□ 1.05
HADHAP40939 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.63■■□□□ 1.05
HADHAP40939 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
HADHAP40939 AL136967.2-201ENST00000623968 743 ntBASIC21.63■■□□□ 1.05
HADHAP40939 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HADHAP40939 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HADHAP40939 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HADHAP40939 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HADHAP40939 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HADHAP40939 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HADHAP40939 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.62■■□□□ 1.05
HADHAP40939 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HADHAP40939 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.62■■□□□ 1.05
HADHAP40939 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HADHAP40939 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HADHAP40939 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
HADHAP40939 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HADHAP40939 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
HADHAP40939 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HADHAP40939 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HADHAP40939 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHAP40939 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHAP40939 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHAP40939 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HADHAP40939 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHAP40939 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
HADHAP40939 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHAP40939 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHAP40939 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHAP40939 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHAP40939 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.61■■□□□ 1.05
HADHAP40939 FAM99A-202ENST00000538190 1989 ntBASIC21.61■■□□□ 1.05
HADHAP40939 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.61■■□□□ 1.05
HADHAP40939 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HADHAP40939 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
HADHAP40939 AC244015.2-201ENST00000616358 1861 ntBASIC21.6■■□□□ 1.05
HADHAP40939 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
HADHAP40939 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.6■■□□□ 1.05
HADHAP40939 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HADHAP40939 AC142381.2-201ENST00000566120 298 ntBASIC21.6■■□□□ 1.05
HADHAP40939 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HADHAP40939 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.6■■□□□ 1.05
HADHAP40939 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HADHAP40939 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.6■■□□□ 1.05
HADHAP40939 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
HADHAP40939 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.59■■□□□ 1.05
HADHAP40939 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.59■■□□□ 1.05
HADHAP40939 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.59■■□□□ 1.05
HADHAP40939 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
HADHAP40939 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HADHAP40939 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HADHAP40939 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.59■■□□□ 1.05
HADHAP40939 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.59■■□□□ 1.05
HADHAP40939 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.59■■□□□ 1.05
HADHAP40939 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.59■■□□□ 1.05
HADHAP40939 AC005837.3-201ENST00000612163 286 ntBASIC21.59■■□□□ 1.05
HADHAP40939 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HADHAP40939 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HADHAP40939 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HADHAP40939 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HADHAP40939 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HADHAP40939 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
HADHAP40939 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
HADHAP40939 TSPY26P-201ENST00000476365 1326 ntBASIC21.58■■□□□ 1.05
HADHAP40939 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HADHAP40939 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.58■■□□□ 1.05
HADHAP40939 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
HADHAP40939 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.58■■□□□ 1.05
HADHAP40939 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HADHAP40939 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.58■■□□□ 1.05
HADHAP40939 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.58■■□□□ 1.05
HADHAP40939 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.58■■□□□ 1.05
HADHAP40939 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HADHAP40939 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HADHAP40939 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
HADHAP40939 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
HADHAP40939 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
HADHAP40939 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HADHAP40939 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HADHAP40939 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HADHAP40939 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
HADHAP40939 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
HADHAP40939 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HADHAP40939 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HADHAP40939 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.57■■□□□ 1.04
HADHAP40939 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HADHAP40939 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
HADHAP40939 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HADHAP40939 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HADHAP40939 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HADHAP40939 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.56■■□□□ 1.04
HADHAP40939 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HADHAP40939 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms