Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RFC3P40938 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC3P40938 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC3P40938 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC3P40938 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC3P40938 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC3P40938 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC3P40938 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.56■□□□□ 0.72
RFC3P40938 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.56■□□□□ 0.72
RFC3P40938 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RFC3P40938 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.56■□□□□ 0.72
RFC3P40938 AC087742.1-201ENST00000575880 1738 ntBASIC19.56■□□□□ 0.72
RFC3P40938 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.56■□□□□ 0.72
RFC3P40938 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC3P40938 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
RFC3P40938 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC3P40938 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC3P40938 KRT87P-202ENST00000534226 1464 ntBASIC19.55■□□□□ 0.72
RFC3P40938 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RFC3P40938 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RFC3P40938 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC3P40938 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC3P40938 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC3P40938 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC3P40938 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC3P40938 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC3P40938 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC3P40938 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC3P40938 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC3P40938 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RFC3P40938 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC3P40938 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.54■□□□□ 0.72
RFC3P40938 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC3P40938 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RFC3P40938 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.54■□□□□ 0.72
RFC3P40938 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC3P40938 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.54■□□□□ 0.72
RFC3P40938 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RFC3P40938 BID-214ENST00000617586 542 ntTSL 5 BASIC19.54■□□□□ 0.72
RFC3P40938 AC073111.5-205ENST00000641717 521 ntBASIC19.54■□□□□ 0.72
RFC3P40938 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.54■□□□□ 0.72
RFC3P40938 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.54■□□□□ 0.72
RFC3P40938 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC3P40938 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RFC3P40938 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC3P40938 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.53■□□□□ 0.72
RFC3P40938 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC3P40938 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC3P40938 AC137767.1-201ENST00000602918 1920 ntBASIC19.53■□□□□ 0.72
RFC3P40938 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC3P40938 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC3P40938 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC3P40938 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.53■□□□□ 0.72
RFC3P40938 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.53■□□□□ 0.72
RFC3P40938 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC3P40938 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.53■□□□□ 0.72
RFC3P40938 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RFC3P40938 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RFC3P40938 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.53■□□□□ 0.72
RFC3P40938 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.52■□□□□ 0.72
RFC3P40938 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC3P40938 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC3P40938 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.52■□□□□ 0.72
RFC3P40938 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC3P40938 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.52■□□□□ 0.72
RFC3P40938 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.52■□□□□ 0.72
RFC3P40938 CDCA4P2-201ENST00000441182 718 ntBASIC19.52■□□□□ 0.72
RFC3P40938 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC3P40938 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC3P40938 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RFC3P40938 AC011767.1-201ENST00000617410 1153 ntBASIC19.52■□□□□ 0.72
RFC3P40938 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC3P40938 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC3P40938 AC055733.4-201ENST00000638462 1354 ntBASIC19.52■□□□□ 0.72
RFC3P40938 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFC3P40938 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
RFC3P40938 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
RFC3P40938 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RFC3P40938 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC3P40938 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFC3P40938 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.51■□□□□ 0.71
RFC3P40938 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFC3P40938 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.51■□□□□ 0.71
RFC3P40938 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC3P40938 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RFC3P40938 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.51■□□□□ 0.71
RFC3P40938 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFC3P40938 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
RFC3P40938 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFC3P40938 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC3P40938 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC3P40938 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFC3P40938 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.5■□□□□ 0.71
RFC3P40938 ID1-201ENST00000376105 1233 ntBASIC19.5■□□□□ 0.71
RFC3P40938 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFC3P40938 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC3P40938 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC3P40938 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.5■□□□□ 0.71
RFC3P40938 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC3P40938 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms