Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 NEM1YHR004C 1341 nt3.46□□□□□ -1.85
RTR1P40084 EMP70YLR083C 2004 nt3.46□□□□□ -1.86
RTR1P40084 BYE1YKL005C 1785 nt3.46□□□□□ -1.86
RTR1P40084 KAP95YLR347C 2586 nt3.46□□□□□ -1.86
RTR1P40084 ISM1YPL040C 3009 nt3.46□□□□□ -1.86
RTR1P40084 TGL1YKL140W 1647 nt3.46□□□□□ -1.86
RTR1P40084 DLS1YJL065C 504 nt3.46□□□□□ -1.86
RTR1P40084 PHD1YKL043W 1101 nt3.46□□□□□ -1.86
RTR1P40084 YGR067CYGR067C 2415 nt3.46□□□□□ -1.86
RTR1P40084 VPS64YDR200C 1815 nt3.46□□□□□ -1.86
RTR1P40084 DYN1YKR054C 12279 nt3.46□□□□□ -1.86
RTR1P40084 CPA2YJR109C 3357 nt3.46□□□□□ -1.86
RTR1P40084 MGT1YDL200C 567 nt3.45□□□□□ -1.86
RTR1P40084 SDT1YGL224C 843 nt3.45□□□□□ -1.86
RTR1P40084 MRP8YKL142W 660 nt3.45□□□□□ -1.86
RTR1P40084 SIL1YOL031C 1266 nt3.45□□□□□ -1.86
RTR1P40084 TMA16YOR252W 537 nt3.45□□□□□ -1.86
RTR1P40084 YPL150WYPL150W 2706 nt3.45□□□□□ -1.86
RTR1P40084 BPT1YLL015W 4680 nt3.44□□□□□ -1.86
RTR1P40084 BUB1YGR188C 3066 nt3.44□□□□□ -1.86
RTR1P40084 RKM4YDR257C 1485 nt3.44□□□□□ -1.86
RTR1P40084 RPC11YDR045C 333 nt3.44□□□□□ -1.86
RTR1P40084 YEL032C-AYEL032C-A 162 nt3.44□□□□□ -1.86
RTR1P40084 GPI14YJR013W 1212 nt3.44□□□□□ -1.86
RTR1P40084 YAL031W-AYAL031W-A 309 nt3.44□□□□□ -1.86
RTR1P40084 MTR2YKL186C 555 nt3.44□□□□□ -1.86
RTR1P40084 IZH2YOL002C 954 nt3.44□□□□□ -1.86
RTR1P40084 MCA1YOR197W 1299 nt3.44□□□□□ -1.86
RTR1P40084 MIC60YKR016W 1623 nt3.44□□□□□ -1.86
RTR1P40084 YGR117CYGR117C 1431 nt3.44□□□□□ -1.86
RTR1P40084 ABD1YBR236C 1311 nt3.44□□□□□ -1.86
RTR1P40084 SLP1YOR154W 1764 nt3.43□□□□□ -1.86
RTR1P40084 SIN3YOL004W 4611 nt3.43□□□□□ -1.86
RTR1P40084 YVC1YOR087W 2028 nt3.43□□□□□ -1.86
RTR1P40084 PUS9YDL036C 1389 nt3.43□□□□□ -1.86
RTR1P40084 RIM1YCR028C-A 408 nt3.43□□□□□ -1.86
RTR1P40084 YDR149CYDR149C 708 nt3.43□□□□□ -1.86
RTR1P40084 WBP1YEL002C 1293 nt3.43□□□□□ -1.86
RTR1P40084 YGR126WYGR126W 693 nt3.43□□□□□ -1.86
RTR1P40084 YIL025CYIL025C 375 nt3.43□□□□□ -1.86
RTR1P40084 YJL028WYJL028W 336 nt3.43□□□□□ -1.86
RTR1P40084 LSM1YJL124C 519 nt3.43□□□□□ -1.86
RTR1P40084 TTI2YJR136C 1266 nt3.43□□□□□ -1.86
RTR1P40084 ERP1YAR002C-A 660 nt3.43□□□□□ -1.86
RTR1P40084 YLR402WYLR402W 192 nt3.43□□□□□ -1.86
RTR1P40084 YPL276WYPL276W 438 nt3.43□□□□□ -1.86
RTR1P40084 YPR077CYPR077C 372 nt3.43□□□□□ -1.86
RTR1P40084 MYO5YMR109W 3660 nt3.43□□□□□ -1.86
RTR1P40084 AYT1YLL063C 1425 nt3.43□□□□□ -1.86
RTR1P40084 YHR078WYHR078W 1659 nt3.43□□□□□ -1.86
RTR1P40084 TCB2YNL087W 3537 nt3.43□□□□□ -1.86
RTR1P40084 PEX1YKL197C 3132 nt3.42□□□□□ -1.86
RTR1P40084 RSE1YML049C 4086 nt3.42□□□□□ -1.86
RTR1P40084 CUE3YGL110C 1875 nt3.42□□□□□ -1.86
RTR1P40084 YGR121W-AYGR121W-A 216 nt3.42□□□□□ -1.86
RTR1P40084 CNS1YBR155W 1158 nt3.42□□□□□ -1.86
RTR1P40084 RPN1YHR027C 2982 nt3.42□□□□□ -1.86
RTR1P40084 SKN7YHR206W 1869 nt3.41□□□□□ -1.86
RTR1P40084 YBL077WYBL077W 432 nt3.41□□□□□ -1.86
RTR1P40084 NDJ1YOL104C 1059 nt3.41□□□□□ -1.86
RTR1P40084 HBT1YDL223C 3141 nt3.41□□□□□ -1.86
RTR1P40084 TOP1YOL006C 2310 nt3.41□□□□□ -1.86
RTR1P40084 SET1YHR119W 3243 nt3.4□□□□□ -1.86
RTR1P40084 RAD5YLR032W 3510 nt3.4□□□□□ -1.86
RTR1P40084 YCR045W-AYCR045W-A 351 nt3.4□□□□□ -1.87
RTR1P40084 RPS22AYJL190C 393 nt3.4□□□□□ -1.87
RTR1P40084 YKL177WYKL177W 339 nt3.4□□□□□ -1.87
RTR1P40084 YPR150WYPR150W 522 nt3.4□□□□□ -1.87
RTR1P40084 NAB6YML117W 3405 nt3.4□□□□□ -1.87
RTR1P40084 AXL1YPR122W 3627 nt3.39□□□□□ -1.87
RTR1P40084 BET1YIL004C 429 nt3.39□□□□□ -1.87
RTR1P40084 YKL071WYKL071W 771 nt3.39□□□□□ -1.87
RTR1P40084 EMG1YLR186W 759 nt3.39□□□□□ -1.87
RTR1P40084 TVP18YMR071C 504 nt3.39□□□□□ -1.87
RTR1P40084 RPC34YNR003C 954 nt3.39□□□□□ -1.87
RTR1P40084 TAF3YPL011C 1062 nt3.39□□□□□ -1.87
RTR1P40084 STP2YHR006W 1626 nt3.38□□□□□ -1.87
RTR1P40084 DNA2YHR164C 4569 nt3.38□□□□□ -1.87
RTR1P40084 YDR431WYDR431W 312 nt3.38□□□□□ -1.87
RTR1P40084 tW(CCA)G1tW(CCA)G1 72 nt3.38□□□□□ -1.87
RTR1P40084 tW(CCA)G2tW(CCA)G2 72 nt3.38□□□□□ -1.87
RTR1P40084 tW(CCA)JtW(CCA)J 72 nt3.38□□□□□ -1.87
RTR1P40084 tW(CCA)KtW(CCA)K 72 nt3.38□□□□□ -1.87
RTR1P40084 tW(CCA)MtW(CCA)M 72 nt3.38□□□□□ -1.87
RTR1P40084 tW(CCA)PtW(CCA)P 72 nt3.38□□□□□ -1.87
RTR1P40084 YKT6YKL196C 603 nt3.38□□□□□ -1.87
RTR1P40084 LTO1YNL260C 597 nt3.38□□□□□ -1.87
RTR1P40084 FES1YBR101C 873 nt3.38□□□□□ -1.87
RTR1P40084 FAR1YJL157C 2493 nt3.38□□□□□ -1.87
RTR1P40084 NMA111YNL123W 2994 nt3.38□□□□□ -1.87
RTR1P40084 PHO5YBR093C 1404 nt3.37□□□□□ -1.87
RTR1P40084 CHS3YBR023C 3498 nt3.37□□□□□ -1.87
RTR1P40084 NFI1YOR156C 2181 nt3.37□□□□□ -1.87
RTR1P40084 YIL054WYIL054W 318 nt3.37□□□□□ -1.87
RTR1P40084 YIL086CYIL086C 309 nt3.37□□□□□ -1.87
RTR1P40084 YIL174WYIL174W 228 nt3.37□□□□□ -1.87
RTR1P40084 RNR2YJL026W 1200 nt3.37□□□□□ -1.87
RTR1P40084 YJL222W-AYJL222W-A 228 nt3.37□□□□□ -1.87
RTR1P40084 MPD1YOR288C 957 nt3.37□□□□□ -1.87
RTR1P40084 YOR387CYOR387C 621 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms