Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCK1P35558 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCK1P35558 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.48■■□□□ 1.19
PCK1P35558 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PCK1P35558 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.48■■□□□ 1.19
PCK1P35558 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
PCK1P35558 AC010542.4-201ENST00000563151 1910 ntBASIC22.48■■□□□ 1.19
PCK1P35558 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.48■■□□□ 1.19
PCK1P35558 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCK1P35558 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCK1P35558 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.47■■□□□ 1.19
PCK1P35558 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
PCK1P35558 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.47■■□□□ 1.19
PCK1P35558 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 EDA-201ENST00000338901 1233 ntBASIC22.47■■□□□ 1.19
PCK1P35558 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.47■■□□□ 1.19
PCK1P35558 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 AC110285.6-201ENST00000617652 491 ntBASIC22.47■■□□□ 1.19
PCK1P35558 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.47■■□□□ 1.19
PCK1P35558 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
PCK1P35558 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 FBXW4P1-201ENST00000426721 2239 ntBASIC22.47■■□□□ 1.19
PCK1P35558 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCK1P35558 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.47■■□□□ 1.19
PCK1P35558 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCK1P35558 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCK1P35558 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCK1P35558 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.46■■□□□ 1.19
PCK1P35558 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.46■■□□□ 1.19
PCK1P35558 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCK1P35558 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.46■■□□□ 1.19
PCK1P35558 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
PCK1P35558 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.46■■□□□ 1.19
PCK1P35558 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCK1P35558 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCK1P35558 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCK1P35558 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCK1P35558 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCK1P35558 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCK1P35558 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.45■■□□□ 1.18
PCK1P35558 SLC25A24-204ENST00000569674 2357 ntBASIC22.45■■□□□ 1.18
PCK1P35558 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCK1P35558 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.45■■□□□ 1.18
PCK1P35558 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCK1P35558 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.45■■□□□ 1.18
PCK1P35558 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.45■■□□□ 1.18
PCK1P35558 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCK1P35558 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCK1P35558 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCK1P35558 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.45■■□□□ 1.18
PCK1P35558 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.45■■□□□ 1.18
PCK1P35558 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.45■■□□□ 1.18
PCK1P35558 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.45■■□□□ 1.18
PCK1P35558 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
PCK1P35558 IGHV3-19-201ENST00000521488 291 ntBASIC22.44■■□□□ 1.18
PCK1P35558 AC027682.1-201ENST00000562846 899 ntBASIC22.44■■□□□ 1.18
PCK1P35558 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.44■■□□□ 1.18
PCK1P35558 AL034346.1-201ENST00000568244 1277 ntBASIC22.44■■□□□ 1.18
PCK1P35558 AC126544.1-201ENST00000580842 1059 ntBASIC22.44■■□□□ 1.18
PCK1P35558 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.44■■□□□ 1.18
PCK1P35558 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.44■■□□□ 1.18
PCK1P35558 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
PCK1P35558 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCK1P35558 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.43■■□□□ 1.18
PCK1P35558 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.43■■□□□ 1.18
PCK1P35558 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.43■■□□□ 1.18
PCK1P35558 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.43■■□□□ 1.18
PCK1P35558 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
PCK1P35558 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.43■■□□□ 1.18
PCK1P35558 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.43■■□□□ 1.18
PCK1P35558 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.43■■□□□ 1.18
PCK1P35558 AC008764.7-201ENST00000593779 1081 ntBASIC22.43■■□□□ 1.18
PCK1P35558 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.43■■□□□ 1.18
PCK1P35558 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
PCK1P35558 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCK1P35558 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PCK1P35558 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCK1P35558 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms