Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0CP27449 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 AC022616.5-201ENST00000518796 181 ntBASIC17.1■□□□□ 0.33
ATP6V0CP27449 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0CP27449 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0CP27449 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0CP27449 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ATP6V0CP27449 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0CP27449 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0CP27449 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0CP27449 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0CP27449 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
ATP6V0CP27449 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0CP27449 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0CP27449 GPX1-201ENST00000419349 1106 ntBASIC17.09■□□□□ 0.33
ATP6V0CP27449 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.09■□□□□ 0.33
ATP6V0CP27449 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0CP27449 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0CP27449 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0CP27449 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP6V0CP27449 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP6V0CP27449 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ATP6V0CP27449 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0CP27449 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.08■□□□□ 0.33
ATP6V0CP27449 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0CP27449 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ATP6V0CP27449 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.08■□□□□ 0.33
ATP6V0CP27449 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.08■□□□□ 0.32
ATP6V0CP27449 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.08■□□□□ 0.32
ATP6V0CP27449 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 AC104564.3-201ENST00000582367 638 ntBASIC17.08■□□□□ 0.32
ATP6V0CP27449 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
ATP6V0CP27449 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ATP6V0CP27449 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP6V0CP27449 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP6V0CP27449 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ATP6V0CP27449 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP6V0CP27449 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP6V0CP27449 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0CP27449 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0CP27449 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0CP27449 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
ATP6V0CP27449 MIR639-201ENST00000384974 98 ntBASIC17.07■□□□□ 0.32
ATP6V0CP27449 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP6V0CP27449 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 AC026471.6-201ENST00000622954 1905 ntBASIC17.07■□□□□ 0.32
ATP6V0CP27449 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ATP6V0CP27449 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP6V0CP27449 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP6V0CP27449 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 GABARAPL3-202ENST00000624044 1851 ntBASIC17.06■□□□□ 0.32
ATP6V0CP27449 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 AC004687.1-201ENST00000579003 1625 ntBASIC17.06■□□□□ 0.32
ATP6V0CP27449 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP6V0CP27449 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP6V0CP27449 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATP6V0CP27449 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms