Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.96■□□□□ 0.95
VARSP26640 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
VARSP26640 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VARSP26640 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
VARSP26640 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
VARSP26640 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.95■□□□□ 0.94
VARSP26640 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VARSP26640 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VARSP26640 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VARSP26640 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.95■□□□□ 0.94
VARSP26640 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARSP26640 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARSP26640 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
VARSP26640 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARSP26640 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARSP26640 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.94■□□□□ 0.94
VARSP26640 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.94■□□□□ 0.94
VARSP26640 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARSP26640 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VARSP26640 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VARSP26640 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.94■□□□□ 0.94
VARSP26640 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VARSP26640 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VARSP26640 AC068587.7-201ENST00000641602 218 ntBASIC20.94■□□□□ 0.94
VARSP26640 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VARSP26640 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VARSP26640 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VARSP26640 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 BX842568.3-201ENST00000418104 571 ntBASIC20.93■□□□□ 0.94
VARSP26640 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.93■□□□□ 0.94
VARSP26640 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.93■□□□□ 0.94
VARSP26640 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.93■□□□□ 0.94
VARSP26640 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VARSP26640 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.92■□□□□ 0.94
VARSP26640 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARSP26640 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VARSP26640 AC010141.3-201ENST00000456659 717 ntBASIC20.92■□□□□ 0.94
VARSP26640 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.92■□□□□ 0.94
VARSP26640 AC079089.2-201ENST00000531211 1277 ntBASIC20.92■□□□□ 0.94
VARSP26640 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.92■□□□□ 0.94
VARSP26640 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARSP26640 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARSP26640 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.92■□□□□ 0.94
VARSP26640 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.92■□□□□ 0.94
VARSP26640 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
VARSP26640 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARSP26640 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
VARSP26640 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.92■□□□□ 0.94
VARSP26640 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
VARSP26640 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VARSP26640 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARSP26640 IRS3P-201ENST00000223076 1006 ntBASIC20.91■□□□□ 0.94
VARSP26640 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARSP26640 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARSP26640 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARSP26640 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VARSP26640 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VARSP26640 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.91■□□□□ 0.94
VARSP26640 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VARSP26640 AC008764.7-201ENST00000593779 1081 ntBASIC20.91■□□□□ 0.94
VARSP26640 AC233992.3-201ENST00000607491 485 ntBASIC20.91■□□□□ 0.94
VARSP26640 AC087239.1-201ENST00000622671 572 ntBASIC20.91■□□□□ 0.94
VARSP26640 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VARSP26640 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VARSP26640 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARSP26640 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VARSP26640 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
VARSP26640 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.9■□□□□ 0.94
VARSP26640 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARSP26640 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
VARSP26640 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARSP26640 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
VARSP26640 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARSP26640 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARSP26640 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
VARSP26640 AP005435.1-201ENST00000529293 1178 ntBASIC20.9■□□□□ 0.94
VARSP26640 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.9■□□□□ 0.94
VARSP26640 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.9■□□□□ 0.94
VARSP26640 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.9■□□□□ 0.94
VARSP26640 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
VARSP26640 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARSP26640 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VARSP26640 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.9■□□□□ 0.94
VARSP26640 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VARSP26640 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
VARSP26640 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VARSP26640 AC092667.1-201ENST00000434301 2586 ntBASIC20.89■□□□□ 0.93
VARSP26640 AL162430.1-201ENST00000480705 870 ntBASIC20.89■□□□□ 0.93
VARSP26640 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.89■□□□□ 0.93
VARSP26640 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VARSP26640 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms