Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 snR189snR189 189 nt4.18□□□□□ -1.74
MSH1P25846 YGR117CYGR117C 1431 nt4.18□□□□□ -1.74
MSH1P25846 IOC2YLR095C 2439 nt4.17□□□□□ -1.74
MSH1P25846 SAG1YJR004C 1953 nt4.17□□□□□ -1.74
MSH1P25846 SPT6YGR116W 4356 nt4.17□□□□□ -1.74
MSH1P25846 RUB1YDR139C 234 nt4.17□□□□□ -1.74
MSH1P25846 HTB1YDR224C 396 nt4.17□□□□□ -1.74
MSH1P25846 WBP1YEL002C 1293 nt4.17□□□□□ -1.74
MSH1P25846 RGI1YER067W 486 nt4.17□□□□□ -1.74
MSH1P25846 OST5YGL226C-A 261 nt4.17□□□□□ -1.74
MSH1P25846 MPC3YGR243W 441 nt4.17□□□□□ -1.74
MSH1P25846 OSH3YHR073W 2991 nt4.17□□□□□ -1.74
MSH1P25846 SVP26YHR181W 687 nt4.17□□□□□ -1.74
MSH1P25846 MMF1YIL051C 438 nt4.17□□□□□ -1.74
MSH1P25846 IRC18YJL037W 675 nt4.17□□□□□ -1.74
MSH1P25846 URA5YML106W 681 nt4.17□□□□□ -1.74
MSH1P25846 RPL15BYMR121C 615 nt4.17□□□□□ -1.74
MSH1P25846 DLT1YMR126C 1029 nt4.17□□□□□ -1.74
MSH1P25846 FAT1YBR041W 2010 nt4.17□□□□□ -1.74
MSH1P25846 KRI1YNL308C 1776 nt4.17□□□□□ -1.74
MSH1P25846 RPO21YDL140C 5202 nt4.16□□□□□ -1.74
MSH1P25846 YEL050W-AYEL050W-A 192 nt4.16□□□□□ -1.74
MSH1P25846 YFL012WYFL012W 447 nt4.16□□□□□ -1.74
MSH1P25846 BTN2YGR142W 1233 nt4.16□□□□□ -1.74
MSH1P25846 CFD1YIL003W 882 nt4.16□□□□□ -1.74
MSH1P25846 YJR096WYJR096W 849 nt4.16□□□□□ -1.74
MSH1P25846 YKL131WYKL131W 522 nt4.16□□□□□ -1.74
MSH1P25846 YML031C-AYML031C-A 336 nt4.16□□□□□ -1.74
MSH1P25846 PRM4YPL156C 855 nt4.16□□□□□ -1.74
MSH1P25846 DAP2YHR028C 2457 nt4.16□□□□□ -1.74
MSH1P25846 UTP25YIL091C 2166 nt4.16□□□□□ -1.74
MSH1P25846 XRS2YDR369C 2565 nt4.15□□□□□ -1.74
MSH1P25846 YPR003CYPR003C 2265 nt4.15□□□□□ -1.74
MSH1P25846 HOM2YDR158W 1098 nt4.15□□□□□ -1.75
MSH1P25846 RPB3YIL021W 957 nt4.15□□□□□ -1.75
MSH1P25846 YJL156W-AYJL156W-A 222 nt4.15□□□□□ -1.75
MSH1P25846 YLL037WYLL037W 381 nt4.15□□□□□ -1.75
MSH1P25846 IDH2YOR136W 1110 nt4.15□□□□□ -1.75
MSH1P25846 FDH1YOR388C 1131 nt4.15□□□□□ -1.75
MSH1P25846 YPL162CYPL162C 822 nt4.15□□□□□ -1.75
MSH1P25846 SPN1YPR133C 1233 nt4.15□□□□□ -1.75
MSH1P25846 PBP2YBR233W 1242 nt4.15□□□□□ -1.75
MSH1P25846 MTL1YGR023W 1656 nt4.15□□□□□ -1.75
MSH1P25846 TFB2YPL122C 1542 nt4.15□□□□□ -1.75
MSH1P25846 YNR065CYNR065C 3351 nt4.14□□□□□ -1.75
MSH1P25846 APA2YDR530C 978 nt4.14□□□□□ -1.75
MSH1P25846 YGL242CYGL242C 546 nt4.14□□□□□ -1.75
MSH1P25846 YIL161WYIL161W 708 nt4.14□□□□□ -1.75
MSH1P25846 CCE1YKL011C 1062 nt4.14□□□□□ -1.75
MSH1P25846 RPL18AYOL120C 561 nt4.14□□□□□ -1.75
MSH1P25846 RAS1YOR101W 930 nt4.14□□□□□ -1.75
MSH1P25846 PPT2YPL148C 522 nt4.14□□□□□ -1.75
MSH1P25846 CTP1YBR291C 900 nt4.14□□□□□ -1.75
MSH1P25846 GCN5YGR252W 1320 nt4.14□□□□□ -1.75
MSH1P25846 SPH1YLR313C 1593 nt4.14□□□□□ -1.75
MSH1P25846 YDR340WYDR340W 303 nt4.13□□□□□ -1.75
MSH1P25846 TLG1YDR468C 675 nt4.13□□□□□ -1.75
MSH1P25846 GPP2YER062C 753 nt4.13□□□□□ -1.75
MSH1P25846 SEC53YFL045C 765 nt4.13□□□□□ -1.75
MSH1P25846 CWC23YGL128C 852 nt4.13□□□□□ -1.75
MSH1P25846 EPT1YHR123W 1176 nt4.13□□□□□ -1.75
MSH1P25846 TEM1YML064C 738 nt4.13□□□□□ -1.75
MSH1P25846 ECM13YBL043W 774 nt4.13□□□□□ -1.75
MSH1P25846 CUP9YPL177C 921 nt4.13□□□□□ -1.75
MSH1P25846 ATP20YPR020W 348 nt4.13□□□□□ -1.75
MSH1P25846 ALA1YOR335C 2877 nt4.13□□□□□ -1.75
MSH1P25846 LOS1YKL205W 3303 nt4.13□□□□□ -1.75
MSH1P25846 SPC105YGL093W 2754 nt4.13□□□□□ -1.75
MSH1P25846 YOL019WYOL019W 1656 nt4.13□□□□□ -1.75
MSH1P25846 DIT2YDR402C 1470 nt4.12□□□□□ -1.75
MSH1P25846 RRN7YJL025W 1545 nt4.12□□□□□ -1.75
MSH1P25846 MCD4YKL165C 2760 nt4.12□□□□□ -1.75
MSH1P25846 DPP1YDR284C 870 nt4.12□□□□□ -1.75
MSH1P25846 PMI40YER003C 1290 nt4.12□□□□□ -1.75
MSH1P25846 YHL026CYHL026C 948 nt4.12□□□□□ -1.75
MSH1P25846 REC104YHR157W 549 nt4.12□□□□□ -1.75
MSH1P25846 PEX15YOL044W 1152 nt4.12□□□□□ -1.75
MSH1P25846 MCT1YOR221C 1083 nt4.12□□□□□ -1.75
MSH1P25846 SIN4YNL236W 2925 nt4.12□□□□□ -1.75
MSH1P25846 RIM4YHL024W 2142 nt4.12□□□□□ -1.75
MSH1P25846 GPI10YGL142C 1851 nt4.11□□□□□ -1.75
MSH1P25846 KIN2YLR096W 3444 nt4.11□□□□□ -1.75
MSH1P25846 UTP5YDR398W 1932 nt4.11□□□□□ -1.75
MSH1P25846 PGS1YCL004W 1566 nt4.11□□□□□ -1.75
MSH1P25846 TSR1YDL060W 2367 nt4.11□□□□□ -1.75
MSH1P25846 SEG1YMR086W 2883 nt4.11□□□□□ -1.75
MSH1P25846 FAD1YDL045C 921 nt4.11□□□□□ -1.75
MSH1P25846 RPS13YDR064W 456 nt4.11□□□□□ -1.75
MSH1P25846 API2YDR525W 330 nt4.11□□□□□ -1.75
MSH1P25846 AML1YGR001C 747 nt4.11□□□□□ -1.75
MSH1P25846 ENT3YJR125C 1227 nt4.11□□□□□ -1.75
MSH1P25846 snR11snR11 258 nt4.11□□□□□ -1.75
MSH1P25846 GRX7YBR014C 612 nt4.11□□□□□ -1.75
MSH1P25846 MSK1YNL073W 1731 nt4.1□□□□□ -1.75
MSH1P25846 PRM15YMR278W 1869 nt4.1□□□□□ -1.75
MSH1P25846 HSP30YCR021C 999 nt4.1□□□□□ -1.75
MSH1P25846 YGR064WYGR064W 369 nt4.1□□□□□ -1.75
MSH1P25846 YHR054CYHR054C 1065 nt4.1□□□□□ -1.75
MSH1P25846 RCE1YMR274C 948 nt4.1□□□□□ -1.75
MSH1P25846 RUF5-1RUF5-1 710 nt4.1□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 27.4 ms