Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL8A2P25067 AC006015.1-201ENST00000429970 570 ntBASIC18.09■□□□□ 0.49
COL8A2P25067 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.09■□□□□ 0.49
COL8A2P25067 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL8A2P25067 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.09■□□□□ 0.49
COL8A2P25067 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL8A2P25067 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL8A2P25067 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL8A2P25067 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
COL8A2P25067 ESRRAP2-201ENST00000418437 1549 ntBASIC18.08■□□□□ 0.49
COL8A2P25067 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.08■□□□□ 0.49
COL8A2P25067 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL8A2P25067 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL8A2P25067 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL8A2P25067 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL8A2P25067 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.08■□□□□ 0.48
COL8A2P25067 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.08■□□□□ 0.48
COL8A2P25067 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.08■□□□□ 0.48
COL8A2P25067 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL8A2P25067 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL8A2P25067 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL8A2P25067 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COL8A2P25067 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
COL8A2P25067 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.07■□□□□ 0.48
COL8A2P25067 AC104187.1-201ENST00000607510 612 ntBASIC18.07■□□□□ 0.48
COL8A2P25067 AC139530.1-201ENST00000575312 1977 ntBASIC18.07■□□□□ 0.48
COL8A2P25067 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.07■□□□□ 0.48
COL8A2P25067 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL8A2P25067 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
COL8A2P25067 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COL8A2P25067 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.06■□□□□ 0.48
COL8A2P25067 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.06■□□□□ 0.48
COL8A2P25067 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.06■□□□□ 0.48
COL8A2P25067 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.06■□□□□ 0.48
COL8A2P25067 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.06■□□□□ 0.48
COL8A2P25067 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.06■□□□□ 0.48
COL8A2P25067 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COL8A2P25067 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 CLDN5-201ENST00000403084 2357 ntBASIC18.06■□□□□ 0.48
COL8A2P25067 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.06■□□□□ 0.48
COL8A2P25067 KRT87P-202ENST00000534226 1464 ntBASIC18.06■□□□□ 0.48
COL8A2P25067 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.06■□□□□ 0.48
COL8A2P25067 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL8A2P25067 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COL8A2P25067 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.05■□□□□ 0.48
COL8A2P25067 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.05■□□□□ 0.48
COL8A2P25067 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.05■□□□□ 0.48
COL8A2P25067 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 C1orf229-201ENST00000623686 2258 ntBASIC18.05■□□□□ 0.48
COL8A2P25067 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.05■□□□□ 0.48
COL8A2P25067 AL034346.1-201ENST00000568244 1277 ntBASIC18.05■□□□□ 0.48
COL8A2P25067 AC080038.1-201ENST00000611274 1154 ntBASIC18.05■□□□□ 0.48
COL8A2P25067 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
COL8A2P25067 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL8A2P25067 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL8A2P25067 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.04■□□□□ 0.48
COL8A2P25067 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL8A2P25067 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
COL8A2P25067 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL8A2P25067 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL8A2P25067 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL8A2P25067 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL8A2P25067 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL8A2P25067 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL8A2P25067 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
COL8A2P25067 EP400NL-214ENST00000641289 2402 ntBASIC18.04■□□□□ 0.48
COL8A2P25067 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL8A2P25067 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COL8A2P25067 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 554.3 ms