Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP8P22894 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP8P22894 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP8P22894 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP8P22894 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.59■■□□□ 1.21
MMP8P22894 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.59■■□□□ 1.21
MMP8P22894 AC005837.3-201ENST00000612163 286 ntBASIC22.59■■□□□ 1.21
MMP8P22894 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.59■■□□□ 1.21
MMP8P22894 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
MMP8P22894 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
MMP8P22894 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
MMP8P22894 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MMP8P22894 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.58■■□□□ 1.21
MMP8P22894 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
MMP8P22894 AP006587.3-201ENST00000525742 1516 ntBASIC22.58■■□□□ 1.21
MMP8P22894 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
MMP8P22894 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.58■■□□□ 1.21
MMP8P22894 AC142381.2-201ENST00000566120 298 ntBASIC22.58■■□□□ 1.21
MMP8P22894 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.58■■□□□ 1.2
MMP8P22894 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
MMP8P22894 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
MMP8P22894 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
MMP8P22894 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
MMP8P22894 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.57■■□□□ 1.2
MMP8P22894 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP8P22894 AC003102.1-202ENST00000563394 1796 ntBASIC22.57■■□□□ 1.2
MMP8P22894 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP8P22894 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP8P22894 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
MMP8P22894 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
MMP8P22894 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
MMP8P22894 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP8P22894 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP8P22894 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP8P22894 MIR638-201ENST00000385237 100 ntBASIC22.56■■□□□ 1.2
MMP8P22894 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.56■■□□□ 1.2
MMP8P22894 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
MMP8P22894 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.56■■□□□ 1.2
MMP8P22894 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
MMP8P22894 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MMP8P22894 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
MMP8P22894 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
MMP8P22894 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.56■■□□□ 1.2
MMP8P22894 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.55■■□□□ 1.2
MMP8P22894 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP8P22894 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.55■■□□□ 1.2
MMP8P22894 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP8P22894 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP8P22894 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP8P22894 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.55■■□□□ 1.2
MMP8P22894 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.55■■□□□ 1.2
MMP8P22894 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
MMP8P22894 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.54■■□□□ 1.2
MMP8P22894 AC026310.3-201ENST00000625186 2373 ntBASIC22.54■■□□□ 1.2
MMP8P22894 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.54■■□□□ 1.2
MMP8P22894 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.54■■□□□ 1.2
MMP8P22894 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.54■■□□□ 1.2
MMP8P22894 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.54■■□□□ 1.2
MMP8P22894 AC104564.3-201ENST00000582367 638 ntBASIC22.54■■□□□ 1.2
MMP8P22894 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.54■■□□□ 1.2
MMP8P22894 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
MMP8P22894 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.54■■□□□ 1.2
MMP8P22894 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
MMP8P22894 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.54■■□□□ 1.2
MMP8P22894 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP8P22894 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
MMP8P22894 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP8P22894 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP8P22894 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
MMP8P22894 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP8P22894 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP8P22894 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
MMP8P22894 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP8P22894 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP8P22894 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MMP8P22894 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.52■■□□□ 1.2
MMP8P22894 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
MMP8P22894 BX005040.4-201ENST00000637145 1518 ntBASIC22.52■■□□□ 1.2
MMP8P22894 AC009237.3-201ENST00000393279 1427 ntBASIC22.52■■□□□ 1.2
MMP8P22894 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.52■■□□□ 1.2
MMP8P22894 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MMP8P22894 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.52■■□□□ 1.2
MMP8P22894 AC012414.1-201ENST00000556676 535 ntBASIC22.52■■□□□ 1.2
MMP8P22894 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.52■■□□□ 1.2
MMP8P22894 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MMP8P22894 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.52■■□□□ 1.2
MMP8P22894 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.52■■□□□ 1.2
MMP8P22894 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.52■■□□□ 1.2
MMP8P22894 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms