Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.6■■□□□ 1.85
KCNA3P22001 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.6■■□□□ 1.85
KCNA3P22001 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNA3P22001 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.6■■□□□ 1.85
KCNA3P22001 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.59■■□□□ 1.85
KCNA3P22001 AC010980.2-201ENST00000587099 1412 ntBASIC26.59■■□□□ 1.85
KCNA3P22001 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNA3P22001 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
KCNA3P22001 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.59■■□□□ 1.85
KCNA3P22001 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.59■■□□□ 1.85
KCNA3P22001 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.59■■□□□ 1.85
KCNA3P22001 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNA3P22001 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.58■■□□□ 1.85
KCNA3P22001 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
KCNA3P22001 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.58■■□□□ 1.85
KCNA3P22001 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
KCNA3P22001 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.58■■□□□ 1.85
KCNA3P22001 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.58■■□□□ 1.85
KCNA3P22001 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.58■■□□□ 1.85
KCNA3P22001 AC053503.5-201ENST00000601508 636 ntBASIC26.58■■□□□ 1.85
KCNA3P22001 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
KCNA3P22001 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
KCNA3P22001 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.85
KCNA3P22001 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
KCNA3P22001 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
KCNA3P22001 ECEL1P3-201ENST00000427961 737 ntBASIC26.57■■□□□ 1.84
KCNA3P22001 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.57■■□□□ 1.84
KCNA3P22001 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.57■■□□□ 1.84
KCNA3P22001 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA3P22001 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.56■■□□□ 1.84
KCNA3P22001 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.56■■□□□ 1.84
KCNA3P22001 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA3P22001 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
KCNA3P22001 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
KCNA3P22001 UBE2SP1-201ENST00000450587 669 ntBASIC26.56■■□□□ 1.84
KCNA3P22001 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.56■■□□□ 1.84
KCNA3P22001 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.56■■□□□ 1.84
KCNA3P22001 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC26.56■■□□□ 1.84
KCNA3P22001 AL359736.2-201ENST00000621992 437 ntBASIC26.56■■□□□ 1.84
KCNA3P22001 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA3P22001 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA3P22001 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA3P22001 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
KCNA3P22001 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KCNA3P22001 AP004607.7-201ENST00000527152 1677 ntBASIC26.55■■□□□ 1.84
KCNA3P22001 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KCNA3P22001 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
KCNA3P22001 MIR1224-201ENST00000408193 85 ntBASIC26.55■■□□□ 1.84
KCNA3P22001 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.55■■□□□ 1.84
KCNA3P22001 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.55■■□□□ 1.84
KCNA3P22001 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.55■■□□□ 1.84
KCNA3P22001 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
KCNA3P22001 AP003097.1-201ENST00000530657 1135 ntBASIC26.55■■□□□ 1.84
KCNA3P22001 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.55■■□□□ 1.84
KCNA3P22001 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.55■■□□□ 1.84
KCNA3P22001 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
KCNA3P22001 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
KCNA3P22001 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.55■■□□□ 1.84
KCNA3P22001 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.54■■□□□ 1.84
KCNA3P22001 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNA3P22001 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC26.54■■□□□ 1.84
KCNA3P22001 AC079089.2-201ENST00000531211 1277 ntBASIC26.54■■□□□ 1.84
KCNA3P22001 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.54■■□□□ 1.84
KCNA3P22001 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.54■■□□□ 1.84
KCNA3P22001 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNA3P22001 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNA3P22001 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNA3P22001 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.54■■□□□ 1.84
KCNA3P22001 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KCNA3P22001 AC142381.3-201ENST00000568208 1670 ntBASIC26.54■■□□□ 1.84
KCNA3P22001 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA3P22001 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA3P22001 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA3P22001 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA3P22001 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA3P22001 AC008403.3-201ENST00000598924 454 ntBASIC26.53■■□□□ 1.84
KCNA3P22001 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.53■■□□□ 1.84
KCNA3P22001 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
KCNA3P22001 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA3P22001 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA3P22001 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA3P22001 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.53■■□□□ 1.84
KCNA3P22001 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
KCNA3P22001 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
KCNA3P22001 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KCNA3P22001 FAM210CP-201ENST00000445714 574 ntBASIC26.52■■□□□ 1.84
KCNA3P22001 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.52■■□□□ 1.84
KCNA3P22001 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.51■■□□□ 1.84
KCNA3P22001 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
KCNA3P22001 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
KCNA3P22001 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA3P22001 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA3P22001 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
KCNA3P22001 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA3P22001 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA3P22001 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA3P22001 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
KCNA3P22001 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
KCNA3P22001 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
KCNA3P22001 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms