Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBCP0CG48 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.72■□□□□ 0.59
UBCP0CG48 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.72■□□□□ 0.59
UBCP0CG48 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBCP0CG48 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.72■□□□□ 0.59
UBCP0CG48 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBCP0CG48 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBCP0CG48 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBCP0CG48 SRD5A1P1-201ENST00000442297 786 ntBASIC18.71■□□□□ 0.59
UBCP0CG48 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.71■□□□□ 0.59
UBCP0CG48 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBCP0CG48 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.71■□□□□ 0.59
UBCP0CG48 MIR3621-201ENST00000580529 85 ntBASIC18.71■□□□□ 0.59
UBCP0CG48 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UBCP0CG48 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBCP0CG48 AC073130.3-201ENST00000624389 2278 ntBASIC18.71■□□□□ 0.59
UBCP0CG48 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBCP0CG48 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBCP0CG48 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBCP0CG48 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBCP0CG48 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.71■□□□□ 0.59
UBCP0CG48 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
UBCP0CG48 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.7■□□□□ 0.58
UBCP0CG48 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
UBCP0CG48 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBCP0CG48 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.7■□□□□ 0.58
UBCP0CG48 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 AC005229.4-201ENST00000610085 2198 ntBASIC18.7■□□□□ 0.58
UBCP0CG48 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.7■□□□□ 0.58
UBCP0CG48 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.7■□□□□ 0.58
UBCP0CG48 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBCP0CG48 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
UBCP0CG48 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
UBCP0CG48 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBCP0CG48 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.69■□□□□ 0.58
UBCP0CG48 AC092667.1-201ENST00000434301 2586 ntBASIC18.69■□□□□ 0.58
UBCP0CG48 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBCP0CG48 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBCP0CG48 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.69■□□□□ 0.58
UBCP0CG48 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
UBCP0CG48 AC010141.3-201ENST00000456659 717 ntBASIC18.69■□□□□ 0.58
UBCP0CG48 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.69■□□□□ 0.58
UBCP0CG48 AL035685.1-201ENST00000636663 812 ntBASIC18.69■□□□□ 0.58
UBCP0CG48 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UBCP0CG48 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBCP0CG48 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBCP0CG48 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBCP0CG48 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBCP0CG48 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.68■□□□□ 0.58
UBCP0CG48 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBCP0CG48 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBCP0CG48 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBCP0CG48 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBCP0CG48 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.68■□□□□ 0.58
UBCP0CG48 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
UBCP0CG48 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBCP0CG48 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBCP0CG48 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBCP0CG48 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.68■□□□□ 0.58
UBCP0CG48 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.68■□□□□ 0.58
UBCP0CG48 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBCP0CG48 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.67■□□□□ 0.58
UBCP0CG48 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.67■□□□□ 0.58
UBCP0CG48 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.67■□□□□ 0.58
UBCP0CG48 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.67■□□□□ 0.58
UBCP0CG48 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBCP0CG48 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.67■□□□□ 0.58
UBCP0CG48 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.66■□□□□ 0.58
UBCP0CG48 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBCP0CG48 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
UBCP0CG48 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UBCP0CG48 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.66■□□□□ 0.58
UBCP0CG48 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms