Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.02■□□□□ 0.64
SPARCP09486 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPARCP09486 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.02■□□□□ 0.64
SPARCP09486 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPARCP09486 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPARCP09486 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SPARCP09486 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPARCP09486 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPARCP09486 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
SPARCP09486 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPARCP09486 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPARCP09486 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPARCP09486 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPARCP09486 SERBP1P1-201ENST00000396021 1160 ntBASIC19.01■□□□□ 0.63
SPARCP09486 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SPARCP09486 AC010141.3-201ENST00000456659 717 ntBASIC19.01■□□□□ 0.63
SPARCP09486 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.01■□□□□ 0.63
SPARCP09486 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.01■□□□□ 0.63
SPARCP09486 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPARCP09486 MIR4466-201ENST00000606121 54 ntBASIC19.01■□□□□ 0.63
SPARCP09486 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SPARCP09486 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPARCP09486 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPARCP09486 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SPARCP09486 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPARCP09486 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPARCP09486 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPARCP09486 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19■□□□□ 0.63
SPARCP09486 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPARCP09486 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SPARCP09486 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19■□□□□ 0.63
SPARCP09486 DUX4L19-201ENST00000557448 1267 ntBASIC19■□□□□ 0.63
SPARCP09486 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19■□□□□ 0.63
SPARCP09486 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19■□□□□ 0.63
SPARCP09486 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19■□□□□ 0.63
SPARCP09486 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SPARCP09486 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPARCP09486 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPARCP09486 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPARCP09486 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SPARCP09486 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPARCP09486 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPARCP09486 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SPARCP09486 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.99■□□□□ 0.63
SPARCP09486 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.99■□□□□ 0.63
SPARCP09486 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
SPARCP09486 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPARCP09486 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.99■□□□□ 0.63
SPARCP09486 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPARCP09486 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SPARCP09486 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPARCP09486 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPARCP09486 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.99■□□□□ 0.63
SPARCP09486 AC026471.6-201ENST00000622954 1905 ntBASIC18.99■□□□□ 0.63
SPARCP09486 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SPARCP09486 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPARCP09486 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPARCP09486 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPARCP09486 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.98■□□□□ 0.63
SPARCP09486 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.98■□□□□ 0.63
SPARCP09486 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPARCP09486 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPARCP09486 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.98■□□□□ 0.63
SPARCP09486 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SPARCP09486 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
SPARCP09486 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPARCP09486 AL138724.1-201ENST00000606771 1088 ntBASIC18.98■□□□□ 0.63
SPARCP09486 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPARCP09486 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPARCP09486 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SPARCP09486 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.98■□□□□ 0.63
SPARCP09486 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPARCP09486 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SPARCP09486 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPARCP09486 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPARCP09486 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SPARCP09486 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.97■□□□□ 0.63
SPARCP09486 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SPARCP09486 AC131281.2-201ENST00000520478 145 ntBASIC18.97■□□□□ 0.63
SPARCP09486 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPARCP09486 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SPARCP09486 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPARCP09486 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPARCP09486 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPARCP09486 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPARCP09486 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPARCP09486 Z98882.1-201ENST00000622160 2253 ntBASIC18.97■□□□□ 0.63
SPARCP09486 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPARCP09486 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.96■□□□□ 0.63
SPARCP09486 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.96■□□□□ 0.63
SPARCP09486 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SPARCP09486 OXCT2P1-201ENST00000447263 1535 ntBASIC18.96■□□□□ 0.63
SPARCP09486 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.96■□□□□ 0.63
SPARCP09486 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPARCP09486 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.96■□□□□ 0.63
SPARCP09486 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.96■□□□□ 0.63
SPARCP09486 AC136469.2-201ENST00000623944 1028 ntBASIC18.96■□□□□ 0.63
SPARCP09486 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPARCP09486 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.96■□□□□ 0.63
SPARCP09486 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms