Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CTSDP07339 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTSDP07339 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTSDP07339 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.75■□□□□ 0.43
CTSDP07339 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSDP07339 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTSDP07339 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTSDP07339 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSDP07339 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTSDP07339 AL499627.2-201ENST00000606283 725 ntBASIC17.75■□□□□ 0.43
CTSDP07339 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSDP07339 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTSDP07339 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTSDP07339 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSDP07339 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTSDP07339 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTSDP07339 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSDP07339 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.74■□□□□ 0.43
CTSDP07339 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CTSDP07339 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSDP07339 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSDP07339 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSDP07339 AC103724.3-201ENST00000564481 992 ntBASIC17.74■□□□□ 0.43
CTSDP07339 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSDP07339 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTSDP07339 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CTSDP07339 LINC01006-201ENST00000333319 2292 ntBASIC17.74■□□□□ 0.43
CTSDP07339 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSDP07339 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTSDP07339 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSDP07339 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTSDP07339 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.74■□□□□ 0.43
CTSDP07339 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.73■□□□□ 0.43
CTSDP07339 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CTSDP07339 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTSDP07339 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTSDP07339 AC103834.1-201ENST00000520383 144 ntBASIC17.73■□□□□ 0.43
CTSDP07339 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTSDP07339 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.73■□□□□ 0.43
CTSDP07339 AL031602.1-201ENST00000633169 911 ntBASIC17.73■□□□□ 0.43
CTSDP07339 AC021242.3-201ENST00000607598 1377 ntBASIC17.73■□□□□ 0.43
CTSDP07339 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSDP07339 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSDP07339 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTSDP07339 OR7E47P-201ENST00000546390 1422 ntBASIC17.72■□□□□ 0.43
CTSDP07339 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CTSDP07339 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.72■□□□□ 0.43
CTSDP07339 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
CTSDP07339 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.72■□□□□ 0.43
CTSDP07339 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.72■□□□□ 0.43
CTSDP07339 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.72■□□□□ 0.43
CTSDP07339 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.72■□□□□ 0.43
CTSDP07339 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSDP07339 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.72■□□□□ 0.43
CTSDP07339 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSDP07339 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTSDP07339 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTSDP07339 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSDP07339 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSDP07339 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTSDP07339 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.72■□□□□ 0.43
CTSDP07339 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTSDP07339 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTSDP07339 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.72■□□□□ 0.43
CTSDP07339 KRT8P33-201ENST00000508125 1423 ntBASIC17.72■□□□□ 0.43
CTSDP07339 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CTSDP07339 FEM1AP1-201ENST00000431297 1995 ntBASIC17.71■□□□□ 0.43
CTSDP07339 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.71■□□□□ 0.43
CTSDP07339 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSDP07339 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CTSDP07339 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSDP07339 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSDP07339 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.71■□□□□ 0.43
CTSDP07339 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
CTSDP07339 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSDP07339 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSDP07339 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTSDP07339 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.71■□□□□ 0.42
CTSDP07339 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.71■□□□□ 0.42
CTSDP07339 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CTSDP07339 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.7■□□□□ 0.42
CTSDP07339 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSDP07339 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 YBX1P4-201ENST00000392794 808 ntBASIC17.7■□□□□ 0.42
CTSDP07339 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSDP07339 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSDP07339 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTSDP07339 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSDP07339 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms