Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
APPP05067 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
APPP05067 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
APPP05067 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
APPP05067 AL162430.1-201ENST00000480705 870 ntBASIC25.65■■□□□ 1.7
APPP05067 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.65■■□□□ 1.7
APPP05067 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.65■■□□□ 1.7
APPP05067 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.65■■□□□ 1.7
APPP05067 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
APPP05067 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.65■■□□□ 1.7
APPP05067 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.65■■□□□ 1.7
APPP05067 AC092053.2-201ENST00000640557 1818 ntBASIC25.65■■□□□ 1.7
APPP05067 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
APPP05067 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
APPP05067 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.65■■□□□ 1.7
APPP05067 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.65■■□□□ 1.7
APPP05067 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
APPP05067 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
APPP05067 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
APPP05067 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
APPP05067 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
APPP05067 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
APPP05067 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.64■■□□□ 1.7
APPP05067 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.64■■□□□ 1.7
APPP05067 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
APPP05067 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
APPP05067 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
APPP05067 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
APPP05067 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
APPP05067 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
APPP05067 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.63■■□□□ 1.69
APPP05067 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
APPP05067 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
APPP05067 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
APPP05067 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.63■■□□□ 1.69
APPP05067 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.63■■□□□ 1.69
APPP05067 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
APPP05067 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
APPP05067 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
APPP05067 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
APPP05067 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
APPP05067 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
APPP05067 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
APPP05067 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.62■■□□□ 1.69
APPP05067 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
APPP05067 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
APPP05067 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
APPP05067 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
APPP05067 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.62■■□□□ 1.69
APPP05067 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
APPP05067 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.62■■□□□ 1.69
APPP05067 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.62■■□□□ 1.69
APPP05067 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
APPP05067 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.62■■□□□ 1.69
APPP05067 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.62■■□□□ 1.69
APPP05067 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.61■■□□□ 1.69
APPP05067 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC25.61■■□□□ 1.69
APPP05067 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 AC079140.4-201ENST00000507448 529 ntBASIC25.61■■□□□ 1.69
APPP05067 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC25.61■■□□□ 1.69
APPP05067 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC25.61■■□□□ 1.69
APPP05067 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.61■■□□□ 1.69
APPP05067 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
APPP05067 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
APPP05067 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
APPP05067 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.6■■□□□ 1.69
APPP05067 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
APPP05067 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
APPP05067 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.6■■□□□ 1.69
APPP05067 NTF6G-201ENST00000591094 616 ntBASIC25.6■■□□□ 1.69
APPP05067 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
APPP05067 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.6■■□□□ 1.69
APPP05067 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
APPP05067 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
APPP05067 AC055733.4-201ENST00000638462 1354 ntBASIC25.59■■□□□ 1.69
APPP05067 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
APPP05067 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
APPP05067 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
APPP05067 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.59■■□□□ 1.69
APPP05067 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.59■■□□□ 1.69
APPP05067 KRT18P5-201ENST00000436075 1291 ntBASIC25.59■■□□□ 1.69
APPP05067 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.59■■□□□ 1.69
APPP05067 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.59■■□□□ 1.69
APPP05067 CPT2-209ENST00000636935 803 ntTSL 5 BASIC25.59■■□□□ 1.69
APPP05067 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
APPP05067 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
APPP05067 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
APPP05067 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
APPP05067 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
APPP05067 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
APPP05067 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.58■■□□□ 1.69
APPP05067 AP006587.3-201ENST00000525742 1516 ntBASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms